Agrobacterium sp. RAC06: BSY240_2919
Help
Entry
BSY240_2919 CDS
T04501
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc00300
Lysine biosynthesis
agc00470
D-Amino acid metabolism
agc01100
Metabolic pathways
agc01110
Biosynthesis of secondary metabolites
agc01120
Microbial metabolism in diverse environments
agc01230
Biosynthesis of amino acids
Module
agc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BSY240_2919 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BSY240_2919 (dapF)
Enzymes [BR:
agc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BSY240_2919 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AOG12503
LinkDB
All DBs
Position
complement(3000685..3001593)
Genome browser
AA seq
302 aa
AA seq
DB search
MSDRVEFARMNGLGNKILVIDMRGRTDRVTPAAAIALAADPATAFDQIMAIHDPKLDGTD
AYIDILNCDGSKAQACGNGTRCVVQALASETGRKSFTFQTIAGILNAVEHADGTISVDMG
KPVFAWDKIPLSEEFHDTSRIELQIGPIDAPILHSPSAMSMGNPHAVFWVDRDPMTYDLE
RFGPLLENHPIFPEKANITLAQVISKTSMVTRTWERGAGLTLACGSAACAAGVSAARTGR
TEREVTITVASSPNRGTLTIDWRPDDKVVMTGPAEWEWSGTVDPTTGGWQRDVSADAEAA
TP
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcgggtcgaattcgcgaggatgaacgggcttggcaacaagatcctggtcatt
gacatgcgcggtcgcaccgaccgggtgacgcctgctgccgccatcgcgctcgccgccgat
cctgcgaccgccttcgaccagatcatggcaatccacgatccgaagctcgacggcaccgac
gcctatatcgacatcctcaattgcgatggctcgaaggcccaggcctgcggcaatggcacc
cgctgcgtggtgcaggcgctcgccagcgaaaccggtcgcaagagcttcaccttccagacc
attgccggcatcctcaacgccgtagagcatgcggatggcacgatctccgtcgacatgggc
aagcccgtctttgcctgggacaagatcccgctctcggaagaattccacgacaccagccgc
atcgagctgcaaatcggtccgatcgacgcgccgatcctgcattcgccctcggccatgtcg
atgggcaatccgcatgctgtgttctgggtcgatcgcgacccgatgacctatgacctggaa
cgtttcgggccgctcctcgaaaaccatccgatcttcccggaaaaggccaatatcacgctg
gcccaggtcatctcgaagacatcaatggtgacacgcacctgggaacgcggcgccggcctg
acgctcgcctgcgggtctgccgcctgcgccgccggcgtatccgccgctcgcacagggcgc
accgagcgcgaggtcacgatcacggtggcgtcgagccccaatcgcggcactctgaccatc
gactggcggccagacgacaaggtcgtgatgaccggtcccgccgaatgggaatggtcgggc
acggttgatccgacgaccggcggctggcagcgcgatgtgagcgccgatgcagaggccgcc
accccgtga
DBGET
integrated database retrieval system