Agrobacterium sp. RAC06: BSY240_3112
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Entry
BSY240_3112 CDS
T04501
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc00020
Citrate cycle (TCA cycle)
agc00190
Oxidative phosphorylation
agc00650
Butanoate metabolism
agc00720
Other carbon fixation pathways
agc01100
Metabolic pathways
agc01110
Biosynthesis of secondary metabolites
agc01120
Microbial metabolism in diverse environments
agc01200
Carbon metabolism
Module
agc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BSY240_3112 (sdhA)
00650 Butanoate metabolism
BSY240_3112 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
BSY240_3112 (sdhA)
00720 Other carbon fixation pathways
BSY240_3112 (sdhA)
Enzymes [BR:
agc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BSY240_3112 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AOG12061
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All DBs
Position
3200767..3202611
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AA seq
614 aa
AA seq
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MATIHNFAQTGKAYTYVDHSYDVVVVGAGGAGLRATLGMAEQGFKTACITKVFPTRSHTV
AAQGGIAASLNNMTPDCWQWHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFS
RNEEGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFIEYFA
LDLIMSDDGSRCTGVVAWNLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGM
IARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLAS
RDVVSRCMTMEIREGRGVGKNKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREP
IPVLPTVHYNMGGIPTNYWGEVLNADSNNPERIIPGLMAVGEAGCASVHGANRLGSNSLI
DLVVFGRAAAIRAAEVIDRTSPIPALNVAACDKIMDRFDNTRHASGQTPTAVLRDKMQRA
MQDDAAVFRTQESLESGCNRLSAIWKELPDIKVTDRSMIWNSDLVETLELHNLMANAITT
VYGAEARKESRGSHAREDYTSGPYGGRDDENWRKHTLAWVSEAGDVKLDYRPVHTELIAE
GIDPKKIAPKARVY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccattcataacttcgcccagaccggcaaggcctacacctatgttgaccattcc
tacgacgtcgtggtcgtcggtgccggtggcgccggactgcgcgcgacgctcggcatggcc
gaacagggcttcaagacggcttgcattaccaaggttttcccgacccgttcgcacacggtc
gcagctcagggcggtatcgccgcctcgctgaacaacatgacgcccgactgctggcagtgg
cacctttacgacaccgtcaagggttccgactggctcggcgacgttgacgccatgcagtat
ctcgccatggaagcgccgaaggcggtctatgagctcgagcattacggcgtgcccttctca
cgtaacgaggaaggcaagatctatcagcgccccttcggcggtcacatgcagaactatggc
gaaggcccgccggtacagcgcacctgtgctgccgccgaccgtaccggccacgccatcctg
cacacgctctacggccagtcgctgcgcaacaatgccgagttcttcatcgagtatttcgcg
ctcgacctgatcatgtctgatgatggcagccgctgcaccggcgtcgttgcctggaacctc
gacgacggcaccatccatcgcttctcagcgaagatggtcgtgctcgcgaccgggggctac
ggccgtgcctacttctctgcaacgtccgctcacacctgcaccggtgacggcggcggcatg
atcgcccgcgcgggtcttccgctgcaggacatggaattcgtccagttccacccgaccggt
atctacggcgctggctgtctgatcaccgaaggcgcacgcggcgaaggcggctatctcgtc
aactccgaaggcgagcgcttcatggagcgttacgcgccctcggcgaaggaccttgcctcg
cgtgacgttgtctcgcgctgcatgacgatggaaatccgtgaaggccgcggcgtcggcaag
aacaaggaccacatcttcctgcatctcgatcacctcgatccggccgtcctgcacgagcgc
ctgccgggcatttcggaatcggcgaagatcttcgccggcgttgatgtgacccgcgagccg
atcccggttctgccgacggttcactacaacatgggcggcattccgacgaattactggggc
gaagtgctgaatgccgactccaacaatccggaacgcatcattccgggcctgatggctgtc
ggtgaagccggttgcgcctcggtgcacggtgcgaaccgtctcggctccaactcgctgatc
gacctcgtggtcttcggtcgtgctgctgcgatccgggctgctgaggtcatcgaccgcacg
tcgccgatcccggcgctgaatgtcgccgcctgcgacaagatcatggaccgcttcgacaac
acgcgtcacgcttcgggccagaccccgaccgctgtgctgcgcgacaagatgcagcgcgcc
atgcaggacgatgcggccgtgttccgcacgcaggaatcgctcgaaagcggttgcaatcgt
ctgtctgcgatctggaaggaactgccggacatcaaggtcaccgaccgttctatgatctgg
aactcggacctggtcgagacgctcgaactgcacaacctgatggccaatgcgatcaccacg
gtctatggcgccgaggctcgcaaggagagccgtggttcgcatgcccgagaagactacacg
tccggtccgtatggcggtcgcgacgacgagaactggcgcaagcatacgctggcctgggtc
tcggaagcgggtgacgtcaagctcgactaccgccctgtccataccgagctcatcgctgaa
ggcatcgatcccaagaagatcgcgcccaaggcccgcgtctactga
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