Agrobacterium sp. RAC06: BSY240_3167
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Entry
BSY240_3167 CDS
T04501
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
agc
Agrobacterium sp. RAC06
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agc03032
]
BSY240_3167
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_3167
Enzymes [BR:
agc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSY240_3167
DNA replication proteins [BR:
agc03032
]
Prokaryotic type
DNA Topoisomerases
BSY240_3167
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSY240_3167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOG08411
UniProt:
A0AAI8D0Y1
LinkDB
All DBs
Position
complement(3266108..3267205)
Genome browser
AA seq
365 aa
AA seq
DB search
MSKTDSGDADASAGPPPSTDDVPELTEIGLVYGTDAEPGISRRRRGKGFSYHLPDGTVIA
DQPLLTRIRRLALPPAYERVWISLDPRSHLQATGYDARGRKQYRYHVDWATWRSERKFDD
LIGFGEALPTIRRRIARDIAEHADSSYFLLSALISLLDVTYMRVGNRAYAQENKTYGATT
LQKRHLTFEPDGIRLSFIAKGGKRVRRKLRHPKLQKILEEIADLPGRDLFSWRDQEGQLH
RIDSGRLNTYLSEITSRRLSAKTFRTWGGSVAAFAEGWKHIDASERPTIRQMCEIASDRL
HNTPTICRSSYVHPAILNLADKNTDLDQVRELIQAAPARALLRADENRLMTFLQAHYARK
DEDKD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccgacagcggggatgcagacgcgagtgcgggacctccgccttcgacggac
gatgtgcctgaactgaccgagatcggtctggtctacggcaccgatgcggagcccggcatc
agtcgccgccgccgcggcaagggcttttcctatcaccttccagacggcaccgtcatcgct
gatcagcccctcctcacacgcatccgcaggctcgcgctgccgccagcctatgaacgcgtc
tggatcagcctcgacccgcgcagtcacctgcaggcgacgggctacgatgccagggggcgc
aagcagtatcgctaccatgttgactgggccacatggcgcagcgagcggaagtttgacgat
ctcatcggcttcggtgaggctctgccgaccatccggcggaggatcgcccgcgacatcgcc
gaacacgccgattcaagttatttcctgctctcagccctgatcagcctgcttgacgtgacc
tacatgcgcgtcgggaaccgcgcttatgcgcaggaaaacaagacctatggcgcaaccacg
cttcagaagcgccatctgaccttcgagccggatggcatccggctgagcttcatcgccaag
ggcggcaagcgggtgcgccgaaagcttcgtcatccgaaactgcagaagatcctcgaagag
attgccgatctgcccgggcgcgatcttttttcctggcgggatcaggaggggcagttgcat
cgcatcgattcgggccgcctcaacacctatctcagtgagatcaccagtaggcggctctcg
gccaagaccttccgcacctggggcggatctgtcgccgcattcgccgaaggctggaagcac
atcgatgcgtcggaacgaccgacgatacgacaaatgtgtgagatcgcctccgaccgcctg
cacaacacgccgacgatctgccgctcgagctatgtgcatccggcgatcctcaacctcgcc
gacaagaacacggacctggatcaagtccgcgaactcatccaggcagcgccggcccgcgcc
ctgctccgtgccgacgaaaacaggctcatgacctttctccaggctcattatgcccggaag
gacgaagacaaagactga
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