Agrobacterium sp. RAC06: BSY240_3369
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Entry
BSY240_3369 CDS
T04501
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc03030
DNA replication
agc03430
Mismatch repair
agc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY240_3369
03430 Mismatch repair
BSY240_3369
03440 Homologous recombination
BSY240_3369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agc03032
]
BSY240_3369
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_3369
Enzymes [BR:
agc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY240_3369
DNA replication proteins [BR:
agc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSY240_3369
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSY240_3369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
PAS_9
Malic_M
Motif
Other DBs
NCBI-ProteinID:
AOG11732
LinkDB
All DBs
Position
3491405..3493477
Genome browser
AA seq
690 aa
AA seq
DB search
MVTRISLRGRILLFFVGLAVGAVAALAVGLWFGYHREASPDMLNAFVQSAIAAGFLILAL
ITWVWFLFDTHLARPIDKVASAMRARAHADVGNDFQAEEARYLGDLADAASATAATLAQT
RGALAEQVQRETTRLSSDKNKLEQLLADVPPAVLLCTGRHHLVFYNGVAQQMLTGSQRPV
CLDRNIFDYLSEGPIRDAHHRLLESSDPDTVVEFICLSPCGRRRLAGRMRLASDNGGDQA
AYVMTLRDVTTEVAAYARRDALLGDVFLQVRPIVSDLRHALVSHGPGTGGDAPVSVQLQA
LDATLADLEARFESCRSDGWPMAPTDVRELAGQLRRDLEGQKLTLDAEVAEIAVRCNAFD
IVSLLGHLVSRVSKATAAAHFHLAVSEAQGAADLTLSWKGGAVSPESVDEWLGEPVFDGG
VTCETILRTHGIVLVVGADDDAPSISTRLRPIERLRPVGADVSRHVVYDFDLLSRLHYEK
LSDARLDSLTYVVFDTETTGLLPEQGDEIVQIAAVRIVNGKRVKNEVFDLLVNPGRPIPP
SASAIHGVTEAMVADAVNVQEAVRQFHRFAEGAVLVAHNAPFDMEFLTRREKEVGLRFTN
PILDTVLVSATAFGRAETHTLDALADRLGVHIDEEDRHTALGDAIATADVFIKLKDMLAG
RGLVRFGEVLTELRTHQRLVRDLNDQARVS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaggatcagcctgcgcggacgtatcctgctcttcttcgtggggctggctgtc
ggtgctgttgcggctttggccgtcggtctgtggttcggctaccaccgcgaagccagcccg
gacatgctgaacgccttcgtgcagagtgctatcgctgccggctttctgatcctcgctctg
atcacctgggtctggttcctcttcgacacccatctcgcacgtcccatcgacaaggtggca
tcggccatgcgtgcccgggcgcatgccgatgtgggcaatgactttcaggcagaggaagcg
cgctatcttggcgatcttgccgatgccgcctccgcaaccgcagcgacccttgcgcagacg
cggggcgccctggcggaacaggtgcagcgggagaccacgcgtctgtcgtccgacaagaac
aagctcgaacagctgctcgccgacgtgccgcctgccgttcttctctgtacgggccgacat
catctcgtcttctacaacggggtggcgcagcagatgctgacgggctcgcagcgcccggtc
tgtcttgatcgcaatatctttgactatctgagcgaagggccgatccgtgacgcgcatcac
cggcttctagaaagctcggatccggacacggtggtcgagttcatctgtctcagcccctgc
ggtcggcgcaggctcgccgggcgcatgaggcttgccagcgacaacggtggcgatcaggcg
gcctatgtcatgacccttcgcgatgtgacgacggaggttgcggcctatgcccggcgtgac
gctcttctcggtgacgtgttcctgcaggtccggcccatcgtctctgacctgcgccatgca
cttgtttcgcatgggcccggcacaggaggcgatgcccctgtttcggtgcagcttcaggcg
ctggatgcgacgctagcggatctcgaagcccgctttgaaagctgtcgatcggatggttgg
ccaatggcgccgacggatgtgagggagctcgccggccaactccgccgtgaccttgagggg
cagaagctcacgctcgacgccgaggtcgccgaaattgccgtccgctgcaatgccttcgat
atcgtcagtctcctgggacaccttgtctcccgggtcagcaaggcgactgctgctgctcat
tttcatctcgcggttagcgaggcccagggggctgccgatcttaccttgtcctggaagggc
ggcgccgtgtcgcccgaaagcgtggatgaatggctgggagagccggtcttcgacggtggg
gtgacctgtgagacgatactcaggacccacggcatcgttctggtcgttggggccgatgat
gacgcgccgtcgatctcgacccggctgcggccgatcgagcggctgcgaccggtcggggcg
gacgtgtcgcggcatgtcgtctacgatttcgatctgctctcgcgcctgcactacgagaaa
ctgtccgacgcgcggctcgatagcctgacctatgtggtcttcgatacggaaacaacgggg
ttgctgccggaacagggcgatgaaatcgtccagatcgcggccgtccgcatcgtcaatgga
aagcgcgtcaagaacgaggttttcgacctgctcgtcaatccggggcggccgataccgccg
tccgcatccgcaatccatggtgtgaccgaggcgatggtcgcagatgccgtcaatgtgcag
gaggccgtgcgccagtttcaccgcttcgccgaaggtgctgtgctcgtggcacacaatgcg
ccattcgacatggagttcctcacgcggcgggagaaggaagtcgggctgcgcttcacgaac
ccgatcctggatacggtgctggtgtcagccaccgccttcggccgcgccgaaacacatacg
ctcgatgctctcgccgacagactgggcgtgcacatcgatgaagaagaccgacacactgcg
ctgggcgatgcgattgcgaccgccgacgtcttcatcaagctgaaggacatgctggccggc
cgcggcctggtgcggtttggagaggtcctgacagagttgcgcactcatcagaggctcgtt
cgcgatctcaatgatcaggcacgcgtgtcctga
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