Agrobacterium sp. RAC06: BSY240_4188
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Entry
BSY240_4188 CDS
T04501
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc00061
Fatty acid biosynthesis
agc00071
Fatty acid degradation
agc01100
Metabolic pathways
agc01212
Fatty acid metabolism
agc02024
Quorum sensing
agc04146
Peroxisome
Module
agc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BSY240_4188
00071 Fatty acid degradation
BSY240_4188
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BSY240_4188
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY240_4188
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
agc01004
]
BSY240_4188
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agc04147
]
BSY240_4188
Enzymes [BR:
agc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BSY240_4188
Lipid biosynthesis proteins [BR:
agc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BSY240_4188
Exosome [BR:
agc04147
]
Exosomal proteins
Exosomal proteins of breast milk
BSY240_4188
Exosomal proteins of breast cancer cells
BSY240_4188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AOG12476
UniProt:
A0AAI8D8V2
LinkDB
All DBs
Position
complement(4371051..4372787)
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AA seq
578 aa
AA seq
DB search
MEHIFTPPRPWLAAYGTGIPQELGDLRYRSIAELVDRSCAENGPRKAFTCVVPNGMNGSL
TYDQVGEMSDAFAAFLHHDCGLRAGDRVAVQLPNGLPYPVVAFGVFKAGCILVNTNPLYT
PSEMIHQFNDSGAKALVIVDMFADKLSEVVPKTGIKTVVLAGVPEFFPKLPEIIIRGVQK
VWNKVLPPIPNIGVPVLRIKEALAKGRIHGADVKAMWAASGPDDLALLQYTGGTTGVAKG
AMLTHGNILTNLDQVRAVSGGVMAREDQVLTALPLYHIFAFTANLMTFFELGARNILIPS
PRPVQNLQRAIENYPITWITGVNTLFNGLMNEEWFAAYPPRKLRAAIAGGTALHEAVATR
WRVMTGTPIAEGYGLSETSPLVSFNPLDDRAKSGSIGIPVPGCDVILVDGDGKLVSSGEP
GELLVRGRQVMLGYWQRPDETATALQNGWFATGDIAVMDDEGFLKIVDRKKDLVLVSGFN
VYPNEVEDALAKMDAVLEAAVVAIPDTKTGEAVRAYVVKNPDHDGELTEEAIRSHCKTLL
SDYKVPKSIVFRDTLPKTPIGKILRKDLKAEVQSEFKK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaacacattttcacgccgccacgaccgtggctggcggcttacggcacaggtatcccg
caggaactgggcgatttgcgctaccgcagcatcgccgaactggtggatcggtcctgcgcc
gagaacggcccgcgcaaggctttcacctgcgttgtaccgaacggcatgaatggcagcctg
acctatgaccaggtcggcgagatgtcggatgccttcgcggccttcctgcaccacgattgc
ggcttgcgcgccggcgaccgggtcgcagtgcaactgccgaacggcctgccctatcccgtg
gtcgccttcggtgtgttcaaggctggctgcattctggtcaacaccaacccgctctacacg
ccgagcgaaatgatccatcagttcaacgattccggggccaaggcgctggtgatcgtcgac
atgttcgccgacaagctgtcggaagtcgtgccgaagacgggtatcaagaccgtggttctc
gccggcgtgccggaattcttccccaagctacccgagatcatcattcgaggtgtccagaag
gtctggaacaaggttctcccgcctatcccgaacatcggcgttcccgttttgcggatcaag
gaagcgctcgccaagggccggattcacggcgcagacgtgaaagccatgtgggccgcgtcg
ggccccgacgacctcgccctgctgcaatatacgggaggcaccaccggcgtcgccaagggc
gccatgctcacccatggcaatatcctgaccaatctcgaccaggtgcgcgcggtatcgggc
ggcgtgatggcccgcgaagatcaggtgctgacggcgcttccgctctatcacatcttcgcc
ttcaccgcgaacctgatgaccttcttcgaactaggcgcacgcaacattctgatcccctcg
ccccgcccggtacagaacctgcagcgggcgatcgaaaactatccgatcacttggatcacc
ggcgtcaacacgctgttcaacggcctgatgaacgaagaatggttcgcagcctaccctccc
aggaagttgcgcgcagcgatcgccggtggcacggcgctgcatgaggcagtcgcaacccgc
tggcgggtgatgacggggacccccatcgccgaaggctacgggctcagcgaaacctcgccg
ctggtcagcttcaatcccctcgatgatcgtgccaaatccggcagcatcggcattcctgta
ccaggctgtgacgtcattctggtggatggcgacggcaagctcgtttcatcaggcgagccg
ggtgaacttctggttcgcggccgccaggtcatgctcggctactggcaacgtccggacgaa
acggcgacggcgctccagaatggctggttcgcgactggcgacatcgccgtcatggacgac
gagggcttcctgaagatcgttgatcgcaagaaggatctggtcctcgtctccggcttcaac
gtctaccccaacgaggtggaggacgcgctcgccaagatggatgcggtcctcgaggccgcc
gtcgtcgccattcccgacaccaagaccggcgaagccgtccgggcctatgtcgtcaagaac
ccggatcacgacggcgagctcacagaggaggcgatccgcagccactgcaagaccctgctc
agcgattacaaggtgccgaaatccatcgtcttccgggacacgctgccaaagacgccgatc
ggcaagatcctgcgcaaggatctcaaggccgaagtgcagagcgaattcaagaagtga
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