Agrobacterium sp. RAC06: BSY240_4259
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Entry
BSY240_4259 CDS
T04501
Symbol
choX
Name
(GenBank) choline ABC transporter, periplasmic binding family protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BSY240_4259 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agc02000
]
BSY240_4259 (choX)
Transporters [BR:
agc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
BSY240_4259 (choX)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
NMT1
vWA_Ro60
Motif
Other DBs
NCBI-ProteinID:
AOG11645
UniProt:
A0AAI8D481
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All DBs
Position
complement(4444110..4445066)
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AA seq
318 aa
AA seq
DB search
MTSLLICRRTLAAAVSLIAISAMPVSAQEAESCSTVRFSDVGWTDITATTATASVLLQAL
GYEPTTTVLSVPVTYSSLKNKDIDVFLGNWMPTMEADIAPYREDKSVEVFGPNLEGAKYT
LATNAKGAELGIKDFADIAKHADALEGKIYGIEPGNDGNRLILDMIDANKFELGDFEVVE
SSEQGMLAQVARAEKDGQPVVFLGWEPHPMNANFKLTYLSGGDDVFGPDFGGATIFTNTR
AGYTAECPNVGKFVTNLKFSLQMENEIMGKILNDGQDAEAAASDWLKANPAAVEPWLAGV
TTKDGGDGLAAVKTALGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacttctcatttgtcgccgcacccttgcggccgctgtatcgctgatcgccatc
agcgccatgccggtctccgcccaggaagccgaaagctgctcgaccgtccgcttctcggat
gtcggctggaccgacatcaccgccaccacagccaccgcctccgttctgctgcaggcgctc
ggctatgagccgacgacaacggtcctctccgtgccggtcacctattcctcgctgaagaac
aaggatatcgacgtcttcctcggcaactggatgccgacgatggaagccgacattgcgccc
taccgtgaagacaagtcggtcgaggtcttcggcccgaacctcgaaggcgcgaaatacacg
ctcgccaccaatgccaagggcgccgaactcggcatcaaggattttgccgacatcgccaag
catgccgacgcgctggaaggcaagatctacggcatcgagccgggcaatgacggcaaccgc
ctgatcctcgacatgatcgacgccaacaagttcgaactcggtgacttcgaagtcgtcgaa
tcctccgaacagggcatgctggcccaggtcgcccgcgccgaaaaggatggccagccggtc
gtcttcctcggctgggaaccgcacccgatgaacgccaacttcaagctgacctatctgtcc
ggcggcgatgacgtcttcgggccggacttcggcggcgcgaccatcttcaccaacacccgc
gccggttacacggccgaatgcccgaatgtcggcaagttcgtcaccaacctcaagttctcg
ctccagatggagaacgagatcatgggcaagatcctgaatgacggccaggatgcagaagcc
gctgcgtccgattggctgaaggccaatccggcggctgtcgagccctggctcgctggcgtc
accaccaaggatggcggcgacggcctcgcggccgtgaagacggcactgggcctctaa
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