Agrobacterium sp. RAC06: BSY240_4417
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Entry
BSY240_4417 CDS
T04501
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc00220
Arginine biosynthesis
agc00240
Pyrimidine metabolism
agc00250
Alanine, aspartate and glutamate metabolism
agc01100
Metabolic pathways
agc01110
Biosynthesis of secondary metabolites
agc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BSY240_4417 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BSY240_4417 (carB)
00220 Arginine biosynthesis
BSY240_4417 (carB)
Enzymes [BR:
agc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BSY240_4417 (carB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
CoA_binding_2
RimK
YopH_N
Motif
Other DBs
NCBI-ProteinID:
AOG08572
LinkDB
All DBs
Position
complement(4604833..4608315)
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AA seq
1160 aa
AA seq
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MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQAVKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
AAIDMAEDRALFREAMTRIGLETPKSMLANATEIKDADRKTHEAARNELKAKLSGAELDK
ALDELENQWNLGETDRKQRYMGHAMAIAAQALDHVGLPAIIRPSFTMGGTGGGIAYNRSE
FYEIINSGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIVCSIENIDPMGVHTGDS
ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPADGRLVVIEMNPRVSRS
SALASKATGFPIAKIAAKLAVGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGAEPTLTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEIPGLGQGDDKNAIR
AAIGTPTPDRLRMVAQALRLGMSPEEVHEGCKIDPWFIAQFKAITDMEARVREHGLPQHA
ENLRTLKAMGFSDARLASLSGKRPKEVAELRNGLNVRPVFKRIDTCAAEFASPTAYMYST
YETPFVGELRSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIMINC
NPETVSTDYDTSDRLYFEPLTAEDVIEILRAEQEKGEVVGVIVQFGGQTPLKLAEALEKN
GIPILGTAPDMIDLAEDRDRFQKLLMKLDLNQPNNGIAYSVEQARLVASEIGFPLVVRPS
YVLGGRAMQIIHSESMLQSYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSYL
TNAIEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKATLDELERQTAAM
AKALNVGGLMNVQYAIKDDVIYVLEVNPRASRTVPFVAKTIGAPIAKIAARIMTGEKLDD
AIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDTLLGPEMRSTGEVIGLDTDFALAFAKS
QLGASVELPRDGTVFVSVRDEDKARVLPAIQILTQIGFKVMATGGTQRFLAENGIDAIKI
NKVLEGRPHIEDAIRNRQVQLVINTTDGNKAISDSKSLRRAALMQKVPYYTTMAGALAAA
EAIRALKSGQLEVRPLQSYF
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgccaagacatcaagtccatcctcatcatcggcgcggggccgattgtcatc
ggccaggcatgtgagttcgactattccggcacccaggccgtcaaggcgctgaaggaagaa
ggataccgggtcatcctggtgaattccaacccggcgaccatcatgaccgatccgggtctt
gccgacgccacttacgtcgagccgatcacgcctgaagtcgtcgccaagatcatcgccaag
gagcgccccgatgcgctgctcccgaccatgggcggccagacggcgctgaacaccgcgctc
tccttgaagcgcatgggcgtgctcgaccgctacaatgtcgagatgatcggcgccaagccc
gccgccatcgacatggcagaagaccgcgccctcttccgcgaagccatgacccgcatcggg
ctggaaaccccgaagtcgatgctcgccaacgcaaccgagatcaaggacgccgaccgcaag
acgcatgaagccgcccgcaacgagctgaaggcgaaactgtcgggcgccgaactcgacaag
gccctcgacgagctcgagaaccagtggaaccttggcgagaccgaccgcaagcagcgctac
atgggtcatgccatggcgattgccgcccaggccctcgaccatgtcggcctgcccgccatc
atccgcccgtccttcaccatgggcggcaccggcggcggcatcgcctataaccgttcggaa
ttctacgagatcatcaattccggcctcgacgcctctcccaccaccgaagtgctgatcgaa
gaatcggtcctcggctggaaggagtatgaaatggaggtcgtccgcgacaaggcggacaac
tgcatcatcgtctgctcgatcgaaaacatcgatccgatgggcgtgcacaccggcgatagc
atcacggtcgcaccggcgctgacgctgacggacaaggaataccagatcatgcgcaacgcc
tcgatcgcggttctgcgcgagatcggcgttgagacgggcggctcgaacgtgcagttcgcc
gtcaacccggccgatggccgccttgtcgtcatcgaaatgaacccgcgcgtttcgcgctcg
tcggcgcttgcttcgaaggccaccggcttcccgattgccaagatcgctgccaagctcgcc
gtaggctacacgctggacgaactcgaaaacgacatcaccggcggcgcgacaccggcctcc
ttcgagccgtcgatcgactacgtcgtcaccaagatcccgcgttttgcattcgaaaaattc
cccggtgccgaaccgacgctgaccaccgcgatgaagtcggtcggcgaagtcatggcgatc
ggccgcaccttcgccgaatcgctgcagaaggcgctgcgcggtctcgaaacgggtctcacc
ggcctcgacgagatcgagatcccgggccttggtcagggcgacgacaagaacgccatccgt
gccgccatcggcacgccgacgcccgaccgtctgcgcatggttgcccaggcccttcgcctc
ggcatgtcgccggaagaagtccacgaaggctgcaagatcgatccgtggttcatcgcccag
ttcaaggcgatcaccgacatggaagcccgtgttcgcgagcatggcctgccgcagcatgcc
gaaaacctgcgcaccctgaaggccatgggcttctccgacgctcgcctcgcctcgctgtcg
ggcaagcgcccgaaggaagtcgcagaactccgcaacgggctgaacgtccgcccggtcttc
aagcgcatcgacacctgcgctgccgaattcgcctcgccgacggcttacatgtattcgacc
tacgagacgcctttcgtcggcgaactgcgctcggaagcccaggtctctgaccgcaagaag
gtcgtcatcctcggcggcggcccgaaccgtatcggccagggcatcgagttcgactattgc
tgctgccatgccgctttcgccctgaaggatgcagggttcgaagcgatcatgatcaactgc
aacccggaaaccgtgtcgaccgactacgacacctccgatcgcctctatttcgagccgctg
acggccgaagacgtgatcgagatcctgcgcgcagagcaggaaaagggtgaagtcgttggc
gtcatcgtccagttcggtggccagaccccgctgaagcttgccgaagcgctggaaaagaac
ggcatcccgatcctcggcaccgcgcccgacatgatcgacctcgccgaagaccgcgaccgc
ttccagaagctgctgatgaagctcgacctcaaccagccgaacaatggcatcgcctactcg
gtcgagcaggcccgcctcgtggcctccgaaatcggcttcccgctggtcgtgcgcccgtct
tacgtgctcggcggccgcgccatgcagatcatccattcggaatcgatgctgcagtcttac
ctgctcgacactgtcccgggtctggtcccagaggatatcaagcagcgctacccgaacgac
aagaccggccagatcaacaccctgcttggcaagaacccgctgcttttcgacagctacctg
accaacgccatcgaagtcgacgtcgacgcactctgcgacggcgagaatgtcttcgtctcc
ggcatcatggagcatatcgaggaagccggcatccattcgggcgatagcgcctgctcgctg
ccctcgcgttcgctctccaaggcaacgctcgacgagctggaacgccagacggccgccatg
gccaaggcgctcaatgtcggcggcctgatgaatgtccagtacgccataaaggacgacgtg
atctacgttctcgaagtgaacccgcgcgcctcgcgcacggtgcccttcgtagccaagacc
atcggcgccccgatcgcgaagatcgccgcccgcatcatgaccggcgaaaagctcgacgac
gcgatcgccgcttatggcgaaaagcccgatccgcgcaacctgaagcacatcgcagtcaag
gaagccgtcttcccgttcgcgcgcttccccggcgtcgacacgctgcttggaccggaaatg
cgctcgaccggcgaagtcatcggcctcgacacggactttgcgctcgccttcgccaagagc
cagctcggagcatccgtcgaactgccgcgagatggcacggtcttcgtctcggtccgcgac
gaggacaaggcccgcgtcctgcccgcgatccagatcctcacccagatcggcttcaaggtc
atggcaacgggcggcacgcagcgcttcctcgccgaaaacggcatcgacgcgatcaagatc
aacaaggtgcttgagggacgtccacatatcgaggacgcgatccgcaaccgtcaggtccag
ctggtcatcaacacgaccgacggcaacaaggcgatctcggactcgaagtcgcttcgccgc
gccgccctgatgcagaaggtgccctactacacgaccatggcaggagccctggcggccgcc
gaagccatccgggcgctgaagagcggccagctcgaggttcgcccgcttcagagctacttc
tga
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