Agrobacterium sp. RAC06: BSY240_689
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Entry
BSY240_689 CDS
T04501
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc00010
Glycolysis / Gluconeogenesis
agc00020
Citrate cycle (TCA cycle)
agc00260
Glycine, serine and threonine metabolism
agc00280
Valine, leucine and isoleucine degradation
agc00310
Lysine degradation
agc00380
Tryptophan metabolism
agc00620
Pyruvate metabolism
agc00630
Glyoxylate and dicarboxylate metabolism
agc00640
Propanoate metabolism
agc00670
One carbon pool by folate
agc00785
Lipoic acid metabolism
agc01100
Metabolic pathways
agc01110
Biosynthesis of secondary metabolites
agc01120
Microbial metabolism in diverse environments
agc01200
Carbon metabolism
agc01210
2-Oxocarboxylic acid metabolism
agc01240
Biosynthesis of cofactors
Module
agc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
agc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BSY240_689 (lpdA)
00020 Citrate cycle (TCA cycle)
BSY240_689 (lpdA)
00620 Pyruvate metabolism
BSY240_689 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
BSY240_689 (lpdA)
00640 Propanoate metabolism
BSY240_689 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BSY240_689 (lpdA)
00280 Valine, leucine and isoleucine degradation
BSY240_689 (lpdA)
00310 Lysine degradation
BSY240_689 (lpdA)
00380 Tryptophan metabolism
BSY240_689 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BSY240_689 (lpdA)
00670 One carbon pool by folate
BSY240_689 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agc04147
]
BSY240_689 (lpdA)
Enzymes [BR:
agc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BSY240_689 (lpdA)
Exosome [BR:
agc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BSY240_689 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_binding_3
FAD_oxidored
NAD_binding_8
HI0933_like
DAO
GIDA
2-Hacid_dh_C
Thi4
Lys_Orn_oxgnase
Amino_oxidase
AlaDh_PNT_C
gp45-slide_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AOG09919
UniProt:
A0AAI8D256
LinkDB
All DBs
Position
complement(736889..738334)
Genome browser
AA seq
481 aa
AA seq
DB search
MSNAYDVIIIGSGPGGYVTAIRAAQLGLKTAIVEREHLGGICLNWGCIPTKALLRSAEIL
DHANHAKSYGLTLNGTMTADVKEVVARSRGVSARLNGGIGFLMKKNKIDVIWGEAKLTKP
GEIVVGKMSKPVVEPQHPVPKGVLGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPDFMPKSLVVMGSGAIGIEFASFYRSMGVDVTVVELMANIMPVEDVEISTFARKQLE
KRGLKIITEAKVSKVEKGANSITAHVETKDGKVQTITADRLISAVGVQGNIENLGLETLG
VKTDRGCIVIDGYGKTNVPGLYAIGDVAGPPMLAHKAEHEGVICIEKIAGLPNVHPMDKA
KIPGCTYCNPQVASVGLTEAKAKEQGREIRVGRYSFAANGKAIALGEDQGMIKTIFDKKT
GELIGAHMVGTEVTELIQGFVVAMNLETTEEELMHTIFPHPTLSEMMKESVLDAYGRVLN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcttacgacgtcatcatcattggctccggccccggcggctacgtcaccgcc
atccgtgccgcccagctcggactgaaaaccgcgatcgttgagcgcgagcatctgggcggc
atctgcctgaactggggctgcatcccgacaaaagcgctgctgcgctcagccgagatcctc
gatcacgccaaccatgcgaaatcctacggcctgacgctgaacggcaccatgacagccgac
gtgaaggaagtcgtcgcccgctcccgcggtgtctctgcccgcctcaatggtggcatcggc
ttcctgatgaagaagaacaagatcgacgtgatctggggcgaagccaagttgaccaagccc
ggcgaaatcgtcgtcggcaagatgtcgaagcctgtcgttgagccgcaacacccggttccg
aagggcgtgctgggtgaaggcacctacaccgccaagcacatcatcgttgcgaccggtgcc
cgtccgcgtgcactccctggcatcgagccggatggcaagctgatctggacctatttcgag
gcgatgaagccggacttcatgccgaagtcgcttgttgtcatgggatcgggcgcgatcggc
atcgaatttgcctccttctaccgctccatgggcgtcgacgtcaccgtcgtcgagctgatg
gccaacatcatgccggtcgaggatgtggagatttctaccttcgcccgcaagcagcttgaa
aagcgcggcctgaagatcattaccgaagccaaggtctccaaggtcgagaagggtgcaaat
tccatcaccgcccatgtcgagaccaaggacggcaaggtgcagactatcaccgctgaccgc
ctgatctccgccgtcggcgttcagggcaatatcgagaacctcggcctcgaaacgctcggc
gtaaagaccgatcgcggctgcatcgtcatcgacggctatggcaagaccaacgtgccgggc
ctctatgcgatcggcgacgttgccggcccgccgatgctcgcccacaaggccgagcatgaa
ggcgtcatctgcatcgagaagatcgcgggcctgccgaatgttcacccgatggacaaggcc
aagatcccgggctgcacctattgcaacccgcaggtcgcctcggttggtctgaccgaagcc
aaagccaaggaacagggccgtgaaatccgcgttggtcgctattccttcgccgccaacggc
aaggcgatcgcgctcggcgaagaccagggcatgatcaagacgatcttcgacaagaagacc
ggcgaactcatcggtgcgcacatggtcggcacggaagtgaccgaacttatccagggcttc
gttgtcgcgatgaacctcgagacgacagaggaagagctgatgcacacgatcttcccgcat
ccgacgctgtcggaaatgatgaaggaaagcgtgctcgatgcctacggccgggtgctgaac
gcctga
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