KEGG   Agrobacterium sp. RAC06: BSY240_689
Entry
BSY240_689        CDS       T04501                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
agc  Agrobacterium sp. RAC06
Pathway
agc00010  Glycolysis / Gluconeogenesis
agc00020  Citrate cycle (TCA cycle)
agc00260  Glycine, serine and threonine metabolism
agc00280  Valine, leucine and isoleucine degradation
agc00310  Lysine degradation
agc00380  Tryptophan metabolism
agc00620  Pyruvate metabolism
agc00630  Glyoxylate and dicarboxylate metabolism
agc00640  Propanoate metabolism
agc00670  One carbon pool by folate
agc00785  Lipoic acid metabolism
agc01100  Metabolic pathways
agc01110  Biosynthesis of secondary metabolites
agc01120  Microbial metabolism in diverse environments
agc01200  Carbon metabolism
agc01210  2-Oxocarboxylic acid metabolism
agc01240  Biosynthesis of cofactors
Module
agc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
agc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
agc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:agc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BSY240_689 (lpdA)
   00020 Citrate cycle (TCA cycle)
    BSY240_689 (lpdA)
   00620 Pyruvate metabolism
    BSY240_689 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    BSY240_689 (lpdA)
   00640 Propanoate metabolism
    BSY240_689 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BSY240_689 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    BSY240_689 (lpdA)
   00310 Lysine degradation
    BSY240_689 (lpdA)
   00380 Tryptophan metabolism
    BSY240_689 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BSY240_689 (lpdA)
   00670 One carbon pool by folate
    BSY240_689 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:agc04147]
    BSY240_689 (lpdA)
Enzymes [BR:agc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BSY240_689 (lpdA)
Exosome [BR:agc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BSY240_689 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 FAD_oxidored NAD_binding_8 HI0933_like DAO GIDA 2-Hacid_dh_C Thi4 Lys_Orn_oxgnase Amino_oxidase AlaDh_PNT_C gp45-slide_C 3HCDH_N
Other DBs
NCBI-ProteinID: AOG09919
UniProt: A0AAI8D256
LinkDB
Position
complement(736889..738334)
AA seq 481 aa
MSNAYDVIIIGSGPGGYVTAIRAAQLGLKTAIVEREHLGGICLNWGCIPTKALLRSAEIL
DHANHAKSYGLTLNGTMTADVKEVVARSRGVSARLNGGIGFLMKKNKIDVIWGEAKLTKP
GEIVVGKMSKPVVEPQHPVPKGVLGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPDFMPKSLVVMGSGAIGIEFASFYRSMGVDVTVVELMANIMPVEDVEISTFARKQLE
KRGLKIITEAKVSKVEKGANSITAHVETKDGKVQTITADRLISAVGVQGNIENLGLETLG
VKTDRGCIVIDGYGKTNVPGLYAIGDVAGPPMLAHKAEHEGVICIEKIAGLPNVHPMDKA
KIPGCTYCNPQVASVGLTEAKAKEQGREIRVGRYSFAANGKAIALGEDQGMIKTIFDKKT
GELIGAHMVGTEVTELIQGFVVAMNLETTEEELMHTIFPHPTLSEMMKESVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcgaacgcttacgacgtcatcatcattggctccggccccggcggctacgtcaccgcc
atccgtgccgcccagctcggactgaaaaccgcgatcgttgagcgcgagcatctgggcggc
atctgcctgaactggggctgcatcccgacaaaagcgctgctgcgctcagccgagatcctc
gatcacgccaaccatgcgaaatcctacggcctgacgctgaacggcaccatgacagccgac
gtgaaggaagtcgtcgcccgctcccgcggtgtctctgcccgcctcaatggtggcatcggc
ttcctgatgaagaagaacaagatcgacgtgatctggggcgaagccaagttgaccaagccc
ggcgaaatcgtcgtcggcaagatgtcgaagcctgtcgttgagccgcaacacccggttccg
aagggcgtgctgggtgaaggcacctacaccgccaagcacatcatcgttgcgaccggtgcc
cgtccgcgtgcactccctggcatcgagccggatggcaagctgatctggacctatttcgag
gcgatgaagccggacttcatgccgaagtcgcttgttgtcatgggatcgggcgcgatcggc
atcgaatttgcctccttctaccgctccatgggcgtcgacgtcaccgtcgtcgagctgatg
gccaacatcatgccggtcgaggatgtggagatttctaccttcgcccgcaagcagcttgaa
aagcgcggcctgaagatcattaccgaagccaaggtctccaaggtcgagaagggtgcaaat
tccatcaccgcccatgtcgagaccaaggacggcaaggtgcagactatcaccgctgaccgc
ctgatctccgccgtcggcgttcagggcaatatcgagaacctcggcctcgaaacgctcggc
gtaaagaccgatcgcggctgcatcgtcatcgacggctatggcaagaccaacgtgccgggc
ctctatgcgatcggcgacgttgccggcccgccgatgctcgcccacaaggccgagcatgaa
ggcgtcatctgcatcgagaagatcgcgggcctgccgaatgttcacccgatggacaaggcc
aagatcccgggctgcacctattgcaacccgcaggtcgcctcggttggtctgaccgaagcc
aaagccaaggaacagggccgtgaaatccgcgttggtcgctattccttcgccgccaacggc
aaggcgatcgcgctcggcgaagaccagggcatgatcaagacgatcttcgacaagaagacc
ggcgaactcatcggtgcgcacatggtcggcacggaagtgaccgaacttatccagggcttc
gttgtcgcgatgaacctcgagacgacagaggaagagctgatgcacacgatcttcccgcat
ccgacgctgtcggaaatgatgaaggaaagcgtgctcgatgcctacggccgggtgctgaac
gcctga

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