Anseongella ginsenosidimutans: FRZ59_08190
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Entry
FRZ59_08190 CDS
T06183
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
agd
Anseongella ginsenosidimutans
Pathway
agd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ59_08190 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agd03019
]
FRZ59_08190 (rny)
Messenger RNA biogenesis [BR:
agd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRZ59_08190 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
LPD3
DUF924
KH_2
Motif
Other DBs
NCBI-ProteinID:
QEC52316
LinkDB
All DBs
Position
1938267..1939823
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AA seq
518 aa
AA seq
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MDQLLLYILAGFLAGILLDRLLLRRMFRKQEMQAKNKAKQALKEADAQAEILKKNKLLEA
KEKFLQLKGEHEKELASRNQGIAQRENALKQKEQSLNQKLENSSRKEQELETLKQGLNRQ
MEVLEKKKTEIEEVKNQHVLQLEKISGLSVEEAKSQLVEALKDEAKTKAMASIKDIVEEA
RLTASKEAKKIVIQTIQRTATESAIENTVSVFNIENDEIKGRVIGREGRNIRALEAATGV
EIIVDDTPEAIILSGFDPVRREIARLSLHRLITDGRIHPARIEEVVAKTKKQLEEEIVEI
GERTVIELGIHGLHPELIRMVGRMRYRSSYGQNLLQHSREVANLCASMAAELGLNVKRAK
RAGLLHDIGKVPEDNPDLPHAILGMQLAEKYKEHPEVCNAIGAHHDEVEMTNMISPVVQV
CDAISGARPGARREVVESYIKRLKEMEDLALSYAGVEKSFAIQAGRELRVVVESERISDQ
QAEMLAFDISNRIQNEMIYPGQVKVTVIRETRAVSYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggatcaactacttttatatattcttgccggctttcttgccggtattttacttgaccgc
ctgttgttaaggcggatgttccggaaacaggagatgcaggctaagaacaaagccaagcaa
gccctgaaagaagcagatgcgcaggccgaaatccttaaaaagaacaagctgctggaagcg
aaggaaaagtttctccagctaaagggggaacatgaaaaggagctggcttcaaggaaccag
ggtattgcacagcgggagaacgccctgaaacaaaaggaacagtctctgaatcaaaagctg
gaaaatagcagcagaaaagagcaggaactggaaacgctgaagcagggcctcaatcgccag
atggaagttttggaaaagaaaaagaccgaaattgaggaagtaaagaaccagcatgtactg
cagctggagaaaatatccggcctttcggtggaggaggccaaaagccagttagtggaagcc
ttaaaggatgaggccaaaacaaaggcaatggcttctatcaaagatatcgtggaagaggcc
aggctcaccgcgtccaaggaagctaagaagatcgtgatccagaccatccagcggacggca
accgaatcggctattgaaaataccgtttccgtatttaatattgagaacgatgaaattaag
ggccgggtgatcgggcgtgaaggccgtaatatccgtgccctggaagctgccaccggcgta
gagatcatcgtggacgatacccccgaagcgattattctttccggttttgatccggtacgg
cgcgagattgcccgcctttccctgcaccgcctgatcaccgacggccgtattcacccggca
aggatcgaggaagtggtggctaaaaccaaaaagcagcttgaagaagagatcgttgaaatc
ggtgagcggacggtaatagaactgggcattcacgggctgcatccggagcttatccgcatg
gtgggccgcatgcggtaccgttcttcctacggacagaacctgctgcagcactcccgtgaa
gtggctaacctttgcgcaagcatggctgccgaactggggctcaatgtaaaacgagccaag
cgggcaggcctcctgcatgatattggaaaggtgcccgaggataatcccgacctgcctcac
gctattcttggaatgcagctggcagaaaaatacaaagaacatcccgaagtctgcaatgcg
ataggagcgcatcatgacgaggttgaaatgaccaatatgatttcgccagtggtccaggta
tgcgatgctatctcaggcgcccgtccgggggctcgccgggaagtggtggaaagctacatt
aagcgtttgaaggaaatggaagacctggcactctcctatgcaggcgttgaaaaaagcttt
gccattcaggcgggccgggaattgcgcgtagtagttgagagcgagcggatttccgaccag
caggccgaaatgctggcttttgatatttccaatcgtattcaaaacgaaatgatctatccg
ggccaggtcaaggtaaccgtgatccgggaaacaagggcggtatcttacgccaagtaa
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