Anseongella ginsenosidimutans: FRZ59_11220
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Entry
FRZ59_11220 CDS
T06183
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agd
Anseongella ginsenosidimutans
Pathway
agd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ59_11220 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agd03019
]
FRZ59_11220 (recQ)
03400 DNA repair and recombination proteins [BR:
agd03400
]
FRZ59_11220 (recQ)
Enzymes [BR:
agd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRZ59_11220 (recQ)
Messenger RNA biogenesis [BR:
agd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FRZ59_11220 (recQ)
DNA repair and recombination proteins [BR:
agd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FRZ59_11220 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
HRDC
DEAD
RecQ_Zn_bind
HEM4
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QEC52847
LinkDB
All DBs
Position
complement(2742558..2744414)
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AA seq
618 aa
AA seq
DB search
MPAQPGAGDPERTSKKGQPRANAYGGGKSLCYQVPALIFEGLTIVISPLIALMKDQVDAL
RVNGIAAAYLNSSQSRNEQEAVFRQVHRNELKLLYLAPERLMASDMQLIGFLKRLKLSLV
AVDEAHCISQWGHDFRPEYRLLGQLRQEIPEVPFMALTATADKLTRADIISRLELKDPPS
YISSFNRENICYKVEPKRNSFQRLLDFLEGNKKESGIIYCLSRNSTESLAAKLQAKGYAA
EAYHAGLEKHIREERQEKFLRDDISIVVATIAFGMGIDKSNVRFVVHMDLPKNIEGYYQE
TGRAGRDGLPGEALLFYSYADVNKLQQFTTVENNEEQSRILLKKLDQMVLYGNLRSCRRK
FLLNYFDEEAPDNCGNCDICLGKYQYIDGTILAQKALSAVARLNESFGAGYVIDFLKGNT
SGRIREWHKSLKTFGVGSDLSRETWSGYLEELIAQEYLKKSEGPYPVLQLGPKSRAVLKG
DETVMLSVRKEPEKAAGQKRKTAGYAGAGNLSAGSEAAGNRTSGSPARRSGNEKDNAEAE
AAAYDKELFEILRVERRRLAETENVPAYIILSDATLRELARHLPEDLEAIRRIPGFGEVK
TGKYGAIFCEVIQDYRKK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
attccggcccaaccaggagcaggtgatccggaacgtacttcaaaaaaaggacagcctcgt
gctaatgcctacgggggcggcaaatccctttgttaccaggtacccgccctgatctttgaa
ggacttaccattgtcatttctccgcttatcgccctgatgaaagaccaggtggacgccctg
cgggtcaacggaattgccgccgcttacctgaattccagccaaagccggaatgaacaggag
gctgttttcagacaggttcaccggaatgaattaaaactgctctacctggcgccggaacgg
ctgatggcttccgatatgcagctgatcggctttctcaagcgcctgaaactctccctggtc
gccgtcgacgaggcacattgtatctcgcagtggggtcatgacttccgcccggaataccgg
ctgctcggccaactgcggcaggagatcccggaagtccctttcatggcgctgacggcaacg
gccgacaagctgacccgggcggatattatcagccgcctggaattgaaagacccgccttcc
tatatctccagctttaaccgggaaaatatctgctacaaggtagagccgaagcggaacagc
tttcagcggctgcttgatttcctggaggggaacaaaaaggaatccggcattatttactgt
ttatcaaggaattcaactgagtcactcgcagctaaacttcaagcgaaaggctatgcggcc
gaggcctatcatgccggcctggaaaagcatatccgggaagaaaggcaggaaaaattcctg
cgggacgatatatccattgtcgtggcaaccatcgcttttgggatgggcattgataagtcc
aatgtgcgcttcgtcgtccatatggacttacctaaaaatattgaaggctattaccaggaa
accggccgggcggggcgcgacggccttcccggtgaagccctgcttttttattcctatgca
gacgtgaataaactccagcaattcactactgtagagaataacgaggagcaaagccgcatc
ctgctcaaaaagctggaccagatggtcctgtacggcaacctccggagctgccgcagaaaa
ttcctccttaattactttgatgaagaagctccggataattgcgggaactgcgatatctgc
cttggcaagtaccagtacattgacgggaccatccttgcccagaaagcactttcggcggta
gcccgcctcaacgaatcattcggtgccgggtatgtgatcgattttttaaaaggaaatact
tccgggcgaatccgggaatggcataaaagccttaaaaccttcggtgtgggcagcgacctc
agcagagaaacctggagcggctatctggaagagctgatcgcgcaggagtatttaaagaaa
tcggaagggccctatcccgtactgcagcttggccctaagagccgggccgtacttaagggg
gatgaaaccgtgatgctgagtgtccgaaaagaaccggaaaaggccgccgggcagaagaga
aagaccgcaggttacgccggcgcagggaacctttcagccggaagcgaggccgccggaaac
cgcacatccggcagtccggcaaggcggtccggcaacgaaaaagataatgcagaagcagaa
gcagcagcctatgataaagaattatttgaaatcctccgcgttgaacgacggcgcctggct
gaaacggaaaatgtaccagcttacattatcctgtcggatgctaccctgagggaacttgcc
cggcatttgccggaagacctggaagctattcgccgcatccccggttttggcgaggttaaa
acggggaaatacggcgccattttctgtgaggtaattcaggattatcgtaaaaagtga
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