Anseongella ginsenosidimutans: FRZ59_17640
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Entry
FRZ59_17640 CDS
T06183
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
agd
Anseongella ginsenosidimutans
Pathway
agd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ59_17640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agd03019
]
FRZ59_17640
03009 Ribosome biogenesis [BR:
agd03009
]
FRZ59_17640
Enzymes [BR:
agd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FRZ59_17640
Messenger RNA biogenesis [BR:
agd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FRZ59_17640
Ribosome biogenesis [BR:
agd03009
]
Prokaryotic type
rRNA helicases
FRZ59_17640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEC53973
LinkDB
All DBs
Position
4158700..4160418
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AA seq
572 aa
AA seq
DB search
MTDFKSLGLSEVLLKAIESMGFVTPTAIQEQAIPALLEGDNDLVGLAQTGTGKTAAFGLP
MLQLIDPAERFPQGLVLCPTRELCLQITGDLKAFSQFLGEVNIVAVYGGANISNQIRDLR
RGAQIIVATPGRMLDIINRGATNLSNIRYLVLDEADEMLNMGFQEDINSILSNTPDTKNT
WLFSATMPNEVKRISRSYMDDPVEITVGSKNTGNVNIEHEYYVVRAREKYAALKRIVDYN
PEIFAIIFTRTKIEAQEIAEHLIRDGYNADALHGDLSQQQRDKVMKRYRDRSLQLLIATD
VAARGIDVSDITHVINYSLPDDIENYTHRSGRTARAGKSGVSIAIINSRETGRIRQIEKV
IGKKFEKGEIPSGYDVCEKQLFALIHKVHEVKVNEEQIGPYLNRIYKEFENLDKEELIRR
FASLEFNRFLEYYLNAPDLNSADERPSKSRERDHTSGGGSFTRMFVNLGSVDDLTRGDLL
RFICDNSGISGQQVGRIDLKGIHTFFEVESSEAETVYNGLKSGSFKGRNIRVDYAEGNKS
GGGRPSKSSRHGAKPSWKSSSRGSQGGKGKRR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacagattttaaatcgcttggcctctcggaggtcttgctcaaagccattgaaagcatg
ggctttgtcactcctaccgccatccaggaacaggctatcccggcattgcttgagggagat
aacgacctggtgggccttgcccagaccggtacggggaaaaccgcggctttcgggctgcct
atgctgcaactgatagatcctgcggaacgctttccccaggggctggtgctgtgtcccacg
cgggaattatgcctccagatcaccggcgacctgaaagccttcagccaattcctcggcgag
gtaaatatcgttgccgtctatggcggggctaatatttctaaccagatacgggacctcaga
agaggggcccagatcattgtagctaccccgggaagaatgctcgatatcattaaccggggc
gcgactaatctttcaaatatccgttacctggtcctggacgaggccgatgagatgctgaac
atgggattccaggaggatatcaacagtatcctgtccaatacgcccgacaccaagaacacc
tggctgttttctgccaccatgcccaacgaggtaaagcggatatcgcgcagctatatggat
gacccggtggagatcacggtaggcagcaaaaacaccggaaatgtaaacatagaacacgaa
tactatgtggtgagagcccgcgagaaatacgcggccctgaaacgcattgtggattataat
cctgaaatatttgcgatcatctttacccgcaccaagatagaggcgcaggagatcgccgaa
cacctcatccgggacggctacaatgccgatgccctgcacggcgacctgtcccagcagcag
cgtgacaaagtgatgaaacgttaccgcgaccgctccctgcagctgctgatcgcaaccgat
gtggcggcaaggggcatcgatgtaagcgatatcacacacgtgatcaattattcactgcct
gacgatatagagaattacacccaccggagcggacggacggcaagggccggcaagtcaggg
gtctccatcgccatcatcaacagccgggaaaccggcaggatcaggcagatcgaaaaggtc
atcgggaagaagttcgaaaagggagagatcccaagcggttatgacgtctgcgaaaagcag
ttattcgccctcattcataaagtgcatgaagtaaaggtaaacgaggagcagattggccct
tacctcaaccgaatttacaaggaatttgaaaaccttgacaaggaggaacttatacgtcgc
tttgcttccctggaattcaatcgtttcctggaatattacctgaatgcgccggatctgaat
tcggcggacgaaagaccttcaaaaagcagggagagggatcatacttccggcggcggcagc
tttacccgcatgtttgtgaatctgggctcagtagacgaccttacccggggtgacctgctc
cgtttcatttgcgacaactccggtatcagcgggcagcaggtgggccgcattgacctgaaa
ggaatccataccttcttcgaagtggagtcttccgaggccgaaacggtttacaatggtctg
aaaagcggctccttcaaaggaaggaatatccgggttgattatgccgaagggaataaaagc
ggcggcggcaggccttccaaatcatcccggcatggggctaagccctcctggaaatcttcc
tcccggggcagccagggaggcaaaggcaagcggaggtaa
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