Archangium gephyra: AA314_03570
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Entry
AA314_03570 CDS
T03948
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
age
Archangium gephyra
Pathway
age02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
age00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AA314_03570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
age03021
]
AA314_03570
Transcription machinery [BR:
age03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA314_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_ner
Sigma70_r4
Sigma70_r1_2
CENP-B_N
SLATT_fungal
Motif
Other DBs
NCBI-ProteinID:
AKJ01944
UniProt:
A0AAC8Q722
LinkDB
All DBs
Position
complement(4355460..4357622)
Genome browser
AA seq
720 aa
AA seq
DB search
MPTQKPSSKVAVKPKKKVAPEIRKKKKPEDASAKGTESVEASSAAAKKAEKAERSEKTAA
AEKATETLKKRKAVTQVDDGDVDPEEAAEEAAAAVEVDPDAVEDEVDEEPIADRKEVKDL
LAAGREKGFLTYDEVNDALPADIVSSDQIDDVMSMFGDNDIEIVDAQKAAQSTEIKPTVA
VEEERAEADEDEKDEDDEPGGKSNDPVRLYLRKMGSVSLLTREGEVEIAKRIEDGEKEVL
RALLACRVAMVEILDIGTRLKNGKLRVRDVIKDAPEEAQAEGEEPEAEVAEEGADGEGQP
AQLAQSELNKIEQINKQIERIRKFAKDCEVLDAELSGKKKLTDVKKKELKQEVKDLRTKM
MEVLEEMRLNKKQVDRIVLNLKGLIERVEKAESELREIERRYGVPMDTLRELLREAKEDP
EAMKKAQRKLNATAEQIEAVERDVRTATRNIKRVEEEANLEVEELRRNYEAIRMGERRAE
RAKTELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATW
WIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIAEKMELPLDK
VRKVLKIAKEPISLETPIGEEEDSHLGDFIEDKSLVSPSDAVINMNLAEQTRKVLATLTP
REEKVLRMRFGIGEKSDHTLEEVGQDFEVTRERIRQIEAKALRKLRHPSRSKRLRSFVES
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcagaagccctcctcgaaggtggccgtcaagcccaagaagaaggtggccccg
gagatccgcaagaagaagaagccggaggacgcctcggccaagggtaccgagagtgttgaa
gccagctccgcggccgcgaagaaggccgagaaggccgagcgcagcgagaagaccgccgcc
gccgagaaggccaccgagacgctcaagaagcgcaaggccgtcacccaggtggacgacggc
gacgtcgaccccgaggaggccgccgaggaggccgccgccgccgtcgaggtggatcccgac
gccgtcgaggacgaggtggatgaggagcccatcgccgaccgcaaggaggtcaaggatctc
ctggccgccggtcgcgagaagggcttcctcacctacgacgaggtcaatgacgccctgccc
gcggacatcgtgtcgtcggatcagatcgacgacgtgatgagcatgttcggcgacaacgac
atcgagatcgtcgacgcccagaaggccgcccagagcacggagatcaagcccacggtcgcg
gtggaggaagagcgcgccgaggccgacgaggacgagaaggacgaggacgacgagccgggt
ggcaagtccaacgatcccgtccgcctctacctgcgcaagatgggcagcgtgagcctcctc
acccgcgagggcgaggtggagatcgccaagcgcattgaagacggcgagaaggaagtgctg
cgggcgctgctggcctgccgcgtggccatggtcgagatcctcgacatcggcacccggctg
aagaacggcaagctgcgcgtgcgcgacgtcatcaaggacgcgcccgaggaggcccaggcc
gagggtgaggagcccgaggccgaggtcgccgaggagggcgccgacggtgagggtcagccg
gcccagctggcgcagagcgagctcaacaagatcgagcagatcaacaagcagatcgagcgc
atccgcaagttcgccaaggactgcgaggtgctcgatgcggagctctccggcaagaagaag
ctcaccgacgtcaagaagaaggagctcaagcaggaggtgaaggatctccggaccaagatg
atggaggtcctggaggagatgcggctcaacaagaagcaggtggaccgcatcgtcctgaac
ctcaaggggctcatcgagcgcgtggagaaggcggagtcggagctgcgcgagatcgagcgc
cgctacggcgtgcccatggacacgctgcgcgagctgctgcgcgaggccaaggaagatccc
gaggccatgaagaaggcgcagcgcaagctcaacgccacggccgagcagatcgaggcggtg
gagcgcgacgtgcgcacggccacgcgcaacatcaagcgggtggaggaggaggccaacctc
gaggtggaggagctgcggcgcaactacgaggccatccgcatgggtgagcgtcgtgccgag
cgcgccaagaccgagctggtcgaggccaacctgcgcctggtggtgtccatcgccaagaag
tacacgaaccgcggcctgcagttcctggacctcatccaggagggcaacatcggcctgatg
aaggcggtggacaagttcgagtacaagcgcggctacaagttctcgacctacgccacgtgg
tggatccgccaggccattacgcgcgccatcgcggaccaggctcgcaccatccgcatcccg
gtgcacatgatcgagacgatcaacaagctcatccgcaccagccgctacctcgtgcaggag
atcggccgcgagccgacgcccgaggagatcgcggagaagatggagctgccgctcgacaag
gtgcgcaaggtgctgaagatcgccaaggagcccatctccctggagacgccgatcggcgag
gaagaggacagccacctgggcgacttcatcgaggacaagagcctggtgtcgccgtcggac
gcggtcatcaacatgaacctggccgagcagacgcggaaggtgctggccacgttgacgccg
cgcgaggagaaggtgctgcggatgcgcttcggcattggcgagaagagcgaccacacgctg
gaagaggtgggccaggacttcgaggtgacgcgcgagcgcatccgtcagatcgaggccaag
gcgctgcgcaagctgcgtcacccgagccgctccaagcgtctgcgctccttcgtggagagc
taa
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