Archangium gephyra: AA314_03600
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Entry
AA314_03600 CDS
T03948
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
age
Archangium gephyra
Pathway
age03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
age00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA314_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
age03019
]
AA314_03600
Enzymes [BR:
age01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AA314_03600
Messenger RNA biogenesis [BR:
age03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA314_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKJ01974
UniProt:
A0AAC8Q731
LinkDB
All DBs
Position
4386724..4387983
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AA seq
419 aa
AA seq
DB search
MSDTFDQLGLSPESLDAVRRARFERPTPIQAQAIPPALAGRDVIGCAATGTGKTAAYVLP
LVERFAGRKGTLGLVLAPTRELVQQISGPVDFFGGPRGVTHAVVIGGEDMEAQAEALKRR
PTLVLATPGRLVDLLGSRVAAFPQLEALVLDEADRMLDMGFQPQLEAILAALPRRRQTLL
FSATLGPDVSRFAREELNRPVRVEVTRSGTPAERAEQRLYVVKPEEKSALLLTLLARDEA
TALIFAASKERADKVHKALERAGYRCGVLHADRTQSQRTQTMKAFREGTYRCLVATDIAA
RGLDVEDVGHVINYDLPHAPEDYVHRIGRTARASASGVASTFVTAKDRLMTERIEQIMRA
GIPRATVPREDPVFQAEWERHQAAQRDPGPPQKDHGVSKRDSGQAPGRHAKSHGRTPRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacctttgaccagctcggcctgtcccccgagtccctcgacgccgtccgccgc
gcgcggttcgagcggcccacgcccatccaggcgcaagccattcccccggcgctcgcgggc
cgggacgtcatcggctgcgcggccacgggcacggggaagaccgccgcgtacgtgctgccg
ctggtggaacgctttgccggccgcaaggggacgctggggctggtgctcgcgcccacccgc
gagctggtgcagcagatctccgggccggtggacttcttcgggggtccgcgcggcgtcacg
cacgcggtggtcatcggcggcgaggacatggaggcgcaggccgaggccctgaagcgccgg
cccacgctggtgctggccacgccggggcggctggtggatctgttggggtctcgtgtcgcg
gcgttcccgcagctggaggccctggtgctggacgaggcggaccggatgctggacatgggc
ttccagccgcagctcgaggccatcctcgcggcgctgccccggcggcggcagacgctgctg
ttctccgcgacgctggggccggacgtgagccgcttcgcccgcgaggagctgaaccggccg
gtgcgggtggaggtgacgcgcagtgggacgcccgccgagcgcgccgagcagcggctgtac
gtggtgaagcccgaggagaagtccgcgctgctgttgacgctgctggcgagggacgaggcg
acggcgctcatcttcgcggcgtcgaaggagcgggcggacaaggtgcacaaggcgctggag
cgggcggggtaccggtgcggggtgctgcacgcggaccggacgcagagccagcgcacccag
acgatgaaggccttccgcgaggggacgtaccggtgcctggtggccacggacatcgcggcg
cgcgggctggacgtggaggacgtggggcacgtcatcaactacgacctgccgcacgcgccg
gaggactacgtgcaccggattggccgcacggcgcgcgcctcggcgagtggcgtggcttcg
acgttcgtcacggcgaaggaccggctgatgaccgagcgcatcgagcagatcatgcgggcc
ggtattccccgcgcgacggtgccgcgcgaggaccccgtcttccaggcggagtgggagcgc
caccaggcggcacagcgcgacccgggccctccgcagaaggaccacggggtgtccaagcgg
gactcggggcaggccccgggccggcacgcgaagtcgcacgggcgcacgcctcggaagtga
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