Archangium gephyra: AA314_06549
Help
Entry
AA314_06549 CDS
T03948
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
age
Archangium gephyra
Pathway
age03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
age00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AA314_06549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
age03021
]
AA314_06549
03400 DNA repair and recombination proteins [BR:
age03400
]
AA314_06549
Enzymes [BR:
age01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AA314_06549
Transcription machinery [BR:
age03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AA314_06549
DNA repair and recombination proteins [BR:
age03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AA314_06549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AKJ04923
UniProt:
A0AAC8QC53
LinkDB
All DBs
Position
complement(8231562..8235782)
Genome browser
AA seq
1406 aa
AA seq
DB search
MKDIFNFFEKPKDPLSFNAIRIALASPDKIRQWSHGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERLGHITLATPVAHIWFLKSL
PSRIGNLLDITLKELEKVLYCESYIIIDPKATPLQRGELVSEEKLHRLYEEHGEESFSAG
MGGEAVRELLKSIDVNRLSEDLRRDMRETNSEAKKKKYAKRLKVAEAFRMSGNKPEWMML
DVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPDIIIRNEKRML
QEAVDALFDNGRRGKTITGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELRLHQCGLPKIMALELFKPFIYNKLEEKGYVTTIKSAKKMVEKERPEVWDILEDVIREH
PVLLNRAPTLHRLGMQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQME
ARVLMMSTNNILSPANGKPIIVPTQDMVLGIYYMTRAREFAHGEGRVFASPDEVRAAYDH
GEVHLQAKVVCRILGKRKETTVGRVLLWDIVPRRVGFDAINKVLDKKSLGGLIDLCYRLT
GEKETVLLADRIRSLGYTNATRAGISIALKDMIIPAKKQEFLDFARKEVAEIENQYLEGL
ITDGERYNKVIDIWAEITEKVAAEMMQQISQDEAVGEKDGKREVRKQPSFNPIYIMADSG
ARGSAQQIRQLAGMRGLMAKPSGEIIETPITANFREGLSVLQYFISTHGARKGLADTALK
TANSGYLTRRLVDVAQDAIINEYDCGTMDGLFIGALVEGGEIIEPLGERILGRVALDDIL
DPVTNDVLVRANEEIDEDRVKKIENSGLDKVKIRSVLTCQAKRGICVECYGRDLARGRKV
SVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAATRRAEQSSLENRNAGTVKFSGLATVQRK
DGSLVAMNRNGELVIVDETGRERERYQVIYGARILVKEGQKLEAGTLLAEWDPFAIPLLT
EVGGTVRFEDIIEGVTMNESLDEVTGLSRKTVVESKDPEARPRITLRDEEGNTKNLISSK
APASYFLPQGSIITVNDGDEIHAGEVIAKVPRETTKTKDITGGLPRVAELFEARKPKDAA
AIAEIDGVVSFGKDTKGKRKLILTPEVAGELRTDLAKEYLISKGKNINVHAGDRVKAGEA
LMEGSANPHDILKVLGEKALAAYLVDEVQEVYRLQGVKINDKHIEVIVRQMLRRVRVTDV
GDTSFLVDEQVEKYVFEEENEKVMAKDQRPAVGEPLLLGITKASLSTESFISASSFQETT
KVLTEAAINGKVDYLRGLKENVIMGRLIPAGTGLPNYKYLDIEVESPADEISEMEAALAI
AHEDDVAPSLPPTGGRPEGSQTSGAA
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacattttcaacttcttcgagaagccgaaggatccgctctcgttcaacgccatc
cgcatcgcgctggcgtcgccggacaagatccggcagtggtctcacggcgaggtcaagaag
ccggagacgatcaactaccgcaccttcaagccggagcgggatggcctgttctgcgcccgc
atcttcggcccggtgaaggactacgagtgcaactgcggcaagtacaagcgcatgaagcac
cgtggcgtcgtgtgcgagaagtgcggcgtggaggtcatccagtccaaggtgcgccgtgag
cgcctgggccacatcacgctcgccactcccgtggcgcacatctggttcctcaagtcgctg
ccctcgcgcatcggcaacctgctcgacatcacgctcaaggagctcgagaaggtcctctac
tgcgagagctacatcatcatcgaccccaaggcgacgccgctgcagcgcggcgagctcgtc
agcgaggagaagctccaccggctctacgaggagcacggtgaggagtccttctccgctggc
atgggtggcgaggccgttcgcgagctgctcaagtcgatcgacgtgaaccgcctgtccgag
gatctccgccgcgacatgcgcgagaccaactcggaggccaagaagaagaagtacgccaag
cgcctcaaggtcgccgaggccttccggatgtccggcaacaagccggagtggatgatgctc
gacgtcatccccgtcatcccgcccgacctgcgtccgctcgtccccctggacggtggccgc
ttcgccacgtcggacctcaacgacctgtaccgccgcgtcatcaaccgcaacaaccgtctc
aagcggctccaggagctcaacgccccggacatcatcatccgcaacgagaagcggatgctc
caggaggccgtggacgcgctgttcgacaacggccgccgcggcaagacgatcaccggcccc
aacaagcggccgctgaagtccctctcggacatgctcaagggcaagcagggccggttccgt
cagaacctgctcggcaagcgcgtggactactccggccgttccgtgatcgtggtcggtccc
gagctgcgcctgcaccagtgcggcctgccgaagatcatggcgctcgagctcttcaagccg
ttcatctacaacaagctcgaagagaagggctacgtcaccaccatcaagagcgccaagaag
atggtggagaaggagcgtcccgaggtctgggacatcctcgaggacgtcatccgcgagcac
ccggtcctcctcaaccgcgccccgaccctgcaccgcctcggcatgcaggccttcgagccc
gtgctgatcgaaggcaaggccatccagctgcacccgctggtgtgcgccgccttcaacgcg
gacttcgacggtgaccagatggccgtccacgtgccgctctctatcgaggctcagatggaa
gcgcgcgtgctgatgatgtccaccaacaacatcctcagccccgccaacggcaagcccatc
atcgtccccacgcaggacatggtgctcggcatctactacatgacccgcgcccgcgagttc
gctcacggcgagggccgtgtgttcgcctcgcccgacgaggtccgcgccgcgtacgatcac
ggcgaggtgcacctgcaggccaaggtcgtctgccgcatcctcggcaagcgcaaggagacc
accgtcggccgcgtcctcctctgggatatcgtgccgcgccgcgtgggcttcgacgccatc
aacaaggtgctcgacaagaagtcgctcggcggcctcatcgacctctgctaccgcctcacc
ggagagaaggagacggtgctgctggccgaccgcatccggtcgctcggctacaccaacgcc
acccgcgccggtatctccatcgcgctcaaggacatgatcattcctgccaagaagcaggag
ttcctggacttcgcgcgcaaggaagtggccgagatcgagaaccagtacctcgagggtctc
atcaccgacggcgagcgctacaacaaggtcatcgatatctgggcggagatcaccgagaag
gtggccgccgagatgatgcagcagatctcccaggacgaggccgtgggcgagaaggacggc
aagcgcgaggtgcgcaagcagccgtcgttcaaccccatctacatcatggccgactccggt
gcccgcggctcggcccagcagatccgccagctggccggtatgcgcggcctcatggccaag
ccctccggtgaaatcatcgagacgcccatcacggccaacttccgtgaaggcctctccgtg
ctgcagtacttcatctccacccacggcgcccgcaagggtctcgcggacacggccctcaag
acggccaactccggctacctcacccgccgtctcgtcgacgtggcccaggacgccatcatc
aacgagtacgactgcggcaccatggacggcctgttcatcggcgccctcgtcgagggcggc
gagatcatcgagccgctcggcgagcgcatcctgggccgcgtggccctcgatgacatcctc
gacccggtcaccaatgacgtgctcgtgcgcgccaacgaggagatcgacgaggaccgcgtc
aagaagatcgagaacagcggcctcgacaaggtgaagatccgctcggtgctcacgtgccag
gccaagcgcggcatctgcgtggagtgctacggccgtgatctggcccgtggccgcaaggtg
tccgtgggcgaggccgtcggcgtcatcgcggcgcagtccatcggcgagccgggtacccag
ctcacgatgcgcaccttccacatcggtggtgcggcgacgcggcgcgccgagcagtccagc
ctcgagaaccgcaacgcgggtacggtgaagttctccggcctcgccacggtgcagaggaag
gacggcagcctggtcgccatgaaccgcaacggcgagctcgtcatcgtcgacgagaccggc
cgcgagcgcgagcgctaccaggtcatctacggcgcccgcatcctcgtgaaggagggccag
aagctcgaggccggcaccctgctggccgagtgggatccgttcgccatccccctgctcacc
gaggtgggcggcaccgtgcgcttcgaggacatcatcgaaggcgtcacgatgaacgagtcg
ctggacgaggtgaccggcctgagccgcaagacggtcgtcgagtccaaggacccggaggcc
cgtccgcgcatcaccctgcgcgacgaggagggcaacaccaagaacctcatctcctccaag
gcgccggccagctacttcctgccccagggctccatcatcaccgtcaacgacggcgatgag
atccacgccggtgaggtcatcgccaaggtgcctcgcgagaccacgaagaccaaggacatc
acgggcggtctgccccgcgtggccgagctcttcgaggcgcgcaagcccaaggacgccgcg
gccatcgcggagatcgacggcgtggtgtccttcggcaaggacaccaagggcaagcgcaag
ctcatcctcacccccgaggtggccggcgagctgcgcaccgacctggccaaggagtacctg
atctccaagggcaagaacatcaacgtgcacgccggcgaccgcgtcaaggccggcgaggcg
ctgatggagggctcggccaacccgcacgacatcctcaaggtgctcggcgagaaggcgctc
gcggcctacctggtggatgaggtgcaggaggtctaccggctccagggcgtgaagatcaac
gacaagcacatcgaggtgatcgtccggcagatgctccgccgcgtgcgcgtcaccgacgtg
ggcgacaccagcttcctcgtcgacgagcaggtcgagaagtacgtgttcgaggaggagaac
gagaaggtcatggccaaggatcagcgtcccgccgtcggcgagccgctgctgctgggtatc
accaaggcctcgctctccaccgagtcgttcatctcggcgtcctccttccaggagaccacc
aaggtgctcaccgaggccgccatcaacggcaaggtggactacctgcgcggcctcaaggag
aacgtcatcatgggccggctcatccccgccggtacgggtctccccaactacaagtacctc
gacatcgaggtggagagccccgccgacgagatctccgagatggaggccgccctggccatc
gcccacgaggacgatgtcgctccgagcctgccccccaccggtggccggcccgagggctcc
cagaccagcggtgccgcctag
DBGET
integrated database retrieval system
