Archangium gephyra: AA314_06550
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Entry
AA314_06550 CDS
T03948
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
age
Archangium gephyra
Pathway
age03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
age00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AA314_06550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
age03021
]
AA314_06550
03400 DNA repair and recombination proteins [BR:
age03400
]
AA314_06550
Enzymes [BR:
age01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AA314_06550
Transcription machinery [BR:
age03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AA314_06550
DNA repair and recombination proteins [BR:
age03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AA314_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
CsgA
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AKJ04924
UniProt:
A0AAC8QCN6
LinkDB
All DBs
Position
complement(8235888..8240120)
Genome browser
AA seq
1410 aa
AA seq
DB search
MPTQIQNNFRVRKTFAKIAKTIDIPNLINIQKQSYEKFLQADIPPEKREDLGLQGVFKSV
FPIRDFNETSSLEFVSYHLEKPKYDVDECHQRGMTYSAPIKVVVRLVVWDKDEETGAQSI
RDVKEQEVYFGEIPLMTQNGTFIINGTERVVVSQLHRSPGAFFDHDKGKSHSSGKLLYNA
RIIPYRGSWIDFEFDHKDILYVRIDRRRKLPATVLIRALGAVADTAKKNPLEFRGSTEEI
LNYYYATETIYLQSNADFEKSVELELLPGQRATRDIKTKTGDVIVKKNRKFTRAAIKKLE
AAKMKTLPIDADELFTKVSAYDVVDENTGEVILECNEEVSQEKIDELLKRDIKEFKVLFI
DNLNVGPYLRETLMLDKIESPEQAIMEIYRRLRPGDPPTPETATNLFSNLFFNPERYDLS
KVGRLKLNFKFGLEEPLDGQILTKRDILEVIRYLVDLKNGKGVIDDIDHLGNRRVRAVGE
LLENQYRIGLVRMERAIKERMSLQEIETLMPHDLINAKPVTAVIKEFFGSSQLSQFMDQT
NPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLIASLSTF
ARVNEFGFVETPYKKVEAGSVTGDVAFYSALEEEKHTIAQANAETDKKGKFVNALVSSRR
GGEFVQAKAEEVDLMDVSPNQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRTAAP
LVGTGIEAIVARDSGVTCVARRDGIVESVDASRIVVKADSAAGAFDISSEVDIYNLLKYQ
RSNQNTCLNQKPIVRKGDRVRKGDVIADGPATETGELALGQNVVVAFMPWQGYNFEDSIL
ISERILKEDVFTSIHIEEFECIARDTKLGKEEITRDIPNVGEEALKDLDESGIIRIGAEV
KPGDVLVGKITPKGETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVVGTVINAKVFSRK
GVEKDERAKQIESMEEAKLLKDQNDEIKVLRDSAYGRLRIMLRGKEIQGKLVDDKGKILL
KKGDIVSDELLATVPYKYWTEISVGDALDGKLRDILRNLEETTEAVKLAFGEKIARIKKG
DELPPGVIKMVKVYVAIKRKLAVGDKMAGRHGNKGVVSRILPEEDLPYLEDGRPVDIVLN
PLGVPSRMNIGQILETHLGWAAKGVGEQLQRYIDENYSGENLKKQLKIVYDDKAFGDFVD
TLSDDEVKSLCYRLKKGIHVATPVFDGARETEIHSLFDEARLPRTGQMVLFDGRTGEPFD
QNVTVGVMYILKLHHLVDEKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYG
AAYTLQEFLTVKSDDVVGRTRMYEAIVKGDNVLESGLPESFNVLLKELQSLALDVELLES
APPERQRSFSGDFGGGGSDGEDRVKTGTEA
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcagatccagaacaacttccgagtgcggaagaccttcgcgaagatcgcgaag
accatcgacattcccaacctcatcaacatccagaagcagtcctacgagaagttcctccag
gctgatatcccgccggagaagcgtgaggacctcgggcttcagggagttttcaagtcggtc
ttccccatccgggatttcaacgagacgtcctcgctcgagttcgtcagctaccacctcgag
aagcccaagtacgacgtggatgagtgccaccagcgtggcatgacctactcggcgcccatc
aaggtcgtcgtgcgcctggtcgtctgggacaaggacgaggagacgggcgcccagtccatc
cgcgatgtgaaggagcaggaggtctacttcggcgaaatcccgctgatgacccagaacggc
accttcatcatcaacgggaccgagcgcgtggtggtcagccagctgcaccgcagcccgggt
gccttcttcgaccacgacaagggcaagagccactcgtctggcaagctgctctacaacgcc
cgcatcatcccgtaccgcggctcgtggatcgacttcgagttcgaccacaaggacatcctc
tacgtccgcatcgaccggcgccgcaagctgccggccacggtgctcatccgcgccctgggc
gcggtcgcggacaccgccaagaagaacccgctggagttccgtggctccaccgaggagatc
ctcaactactactacgccacggagaccatctacctccagagcaacgccgacttcgagaag
tcggtggagctggagctgctgcccggtcagcgcgccacgcgcgacatcaagacgaagacg
ggcgacgtcatcgtcaagaagaaccgcaagttcacccgcgccgccatcaagaagctcgag
gcggccaagatgaagacgctccccatcgacgcggacgagctcttcaccaaggtgtccgcc
tacgacgtggtggacgagaacaccggcgaggtcatcctcgagtgcaacgaggaagtctcg
caggagaagatcgacgagctcctcaagcgcgacatcaaggagttcaaggtcctcttcatc
gacaacctcaacgtgggtccctacctgcgtgagacgttgatgctggacaagatcgagtcg
cccgagcaggcgatcatggagatctaccgccgcctgcgcccgggagatcccccgacgccg
gagacggccaccaacctgttcagcaacctcttcttcaaccccgagcgctacgacctgtcc
aaggtcggccgcctcaagctgaacttcaagttcggcctcgaggagccgctcgacgggcag
atcctcaccaagcgcgacatcctcgaggtcatccgctacctggtggacctcaagaacggc
aagggtgtgatcgacgacatcgatcacctcggcaaccgccgtgtgcgcgcggtgggcgag
ctgctggagaaccagtaccgcatcggtctggtgcgcatggagcgggcgatcaaggagcgc
atgagcctccaggagatcgagacgctcatgccgcacgacctgatcaacgccaagccggtg
acggcggtcatcaaggagttcttcgggtccagccagctgtcgcagttcatggaccagacg
aaccccctgtccgaggtcacgcacaagcggcgtctgtccgccctcgggcccggcggcctc
acccgcgagcgcgcgggcttcgaggtgcgcgacgtgcacccgacgcactacggccgcatc
tgccccatcgagacgccggaaggcccgaacatcggcctcatcgcgtcgctgtccaccttc
gctcgcgtcaacgagttcggcttcgtcgagacgccgtacaagaaggtggaggctggctcg
gtcaccggtgacgtggccttctactccgcgctcgaggaggagaagcacacgatcgcccag
gccaacgccgagaccgacaagaagggcaagttcgtcaacgccctcgtgtcctctcgccgc
ggcggtgagttcgtccaggccaaggccgaggaagtggacctgatggacgtgtccccgaac
cagctggtgtcggtggccgcctccctcatcccgttcctcgagaacgacgacgccaaccgc
gccctcatgggctcgaacatgcagcgccaggccgttccgctgctgcgcaccgccgctccg
ctcgtgggcaccggcatcgaggcgatcgtcgcccgcgactccggcgtcacctgcgtggcc
cggcgcgatggcatcgtggagagcgtggacgccagccgcatcgtggtgaaggcggactcc
gccgcgggcgcgttcgacatctccagcgaggtcgacatctacaacctcctgaagtaccag
cgctccaaccagaacacgtgcctcaaccagaagcccatcgtccgcaagggcgaccgggtg
cggaagggtgacgtgatcgccgacggtcccgccaccgagaccggcgagctggcgctgggc
cagaacgtggtcgtcgcgttcatgccgtggcagggctacaacttcgaggactccatcctc
atctccgagcgcatcctcaaggaggacgtcttcacgtccatccacatcgaggagttcgag
tgcatcgcgcgcgacaccaagctcggcaaggaggagatcacccgcgacatcccgaacgtg
ggtgaggaggccctcaaggacctcgacgagagcggcatcatccgcatcggcgccgaggtg
aagcctggcgacgtgctcgtgggcaagatcactccgaagggcgagacccagctctctccc
gaggagaagctgctgcgcgccatcttcggtgagaaggccggcgacgtgcgcgacagctcg
ctgcgcgtgccccccggcgtggtgggcaccgtcatcaacgccaaggtgttcagccgcaag
ggcgtcgagaaggacgagcgcgccaagcagatcgagtccatggaggaggccaagctcctc
aaggaccagaacgacgagatcaaggtcctgcgcgacagcgcctacggccgcctgcgcatc
atgctccgcggcaaggagatccagggcaagctcgtggacgacaagggcaagatcctcctg
aagaagggggacatcgtctccgacgagctgctggccaccgtcccgtacaagtactggacg
gagatctccgtcggcgatgcgctcgacggcaagctgcgcgacatcctccgcaacctggag
gagaccaccgaggccgtgaagctggccttcggcgagaagatcgcccgcatcaagaagggc
gatgagctcccgccgggcgtcatcaagatggtcaaggtgtacgtcgccatcaagcgcaag
ctggccgtgggcgacaagatggccggccgccacggtaacaagggcgtcgtctcccgcatc
ctccccgaggaggacctgccgtacctcgaggacgggcgtccggtggacatcgtgctcaac
ccgctgggcgtgccctcgcgcatgaacatcgggcagatcctcgagacgcacctgggctgg
gccgccaagggcgtgggcgagcagctccagcgctacatcgacgagaactacagcggcgag
aacctcaagaagcagctgaagatcgtctacgacgacaaggccttcggcgacttcgtggac
accctgtccgatgacgaggtcaagagcctgtgctaccgcctgaagaagggcatccatgtc
gccacgccggtgttcgacggcgcgcgcgagacggagatccactcgctcttcgatgaggcc
cgcctgccgcgtaccggccagatggtgctcttcgacggccgcaccggtgagccgttcgac
cagaacgtcaccgtgggcgtcatgtacatcctcaagctgcaccacctggtggacgagaag
atccacgcccgctccatcggaccctactcgctcgtcacgcagcagcccctgggcggcaag
gcccagttcggcggccagcgtctgggagagatggaagtgtgggcgatggaggcctacggc
gcggcgtacacgctccaggagttcctcaccgtcaagtccgacgacgtggtgggccgcacg
cgcatgtacgaggcgatcgtcaagggcgacaacgtcctcgagtccggcctgcccgagtcg
ttcaacgtcctcctcaaggagctccagtcgctcgcgctcgacgtcgagctgctggagagc
gctccgcccgagcgccagcgctccttctccggagacttcggtggtggtggcagtgatggc
gaggaccgcgtgaagaccggtaccgaggcctag
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integrated database retrieval system
