Archangium gephyra: AA314_07884
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Entry
AA314_07884 CDS
T03948
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
age
Archangium gephyra
Brite
KEGG Orthology (KO) [BR:
age00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
age03016
]
AA314_07884
Enzymes [BR:
age01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AA314_07884
Transfer RNA biogenesis [BR:
age03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AA314_07884
Prokaryotic type
AA314_07884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AKJ06258
UniProt:
A0AAC8QEI6
LinkDB
All DBs
Position
complement(9880556..9881425)
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AA seq
289 aa
AA seq
DB search
MDGVLVIDKPKGPTSFDVVRQVRGLLRIKKVGHTGTLDPMATGVLPLCLGEATKVAGFIT
EGDKAYDAVVRLGAETDTQDAEGKVVAEAPVPALTSALLEDVLGRFRGSFDQVPPMYSAV
KVGGKRLYELARAGEEVERASRHVTVYELVLRDFSANQLRLSVRCSKGFFVRTLAYDIGR
ALGCGAHLEALRRTHSGPFSLAQSLPLADLAELAREPEALAKRLVPISEALTDLPAVRVS
AADAARVSHGVPVEAPAHPGRVRVVDPSDALLAVAEVVRGRLRYLRVLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtcctggtcatcgataagcccaaggggcccacctcgttcgacgtggtgcgg
caggtccggggtctgctcagaataaagaaggtgggccacaccggcaccctggatcccatg
gccacgggggtgctccccttgtgcctgggcgaggcgaccaaggtggccggcttcatcacc
gagggcgacaaggcctatgacgccgtggtgcgtctgggcgcggagacggacacccaggac
gccgagggcaaggtggtggccgaggctccggtgcccgccctgacttccgcgctgctggag
gacgtgctgggccgcttccgcggctccttcgaccaggtgccgcccatgtactcggcggtg
aaggtgggcgggaagcggctgtacgagctcgcccgtgctggcgaggaagtggagcgcgcc
agccgccacgtgacggtgtacgagctggtgctgcgcgacttcagcgccaaccagttgcgc
ctgtcggtgcgctgctccaagggcttcttcgtgcgcacgctcgcctatgacatcggccgg
gcgctgggctgcggggcccacctggaggcgctgcggcgcacccacagcggtcccttctcc
ctggcgcagtccctgccgctggcggacctggccgagctggcccgggagcccgaggccctc
gcgaagcggctggtgcccatctccgaggccctcacggacctgcccgcggtgcgcgtgagc
gcggcggatgcggcccgggtgtcccacggggtgcccgtggaggctcccgcccatcccggc
cgggtgcgggtggtggacccctcggacgcgctgctcgccgtggccgaggtggtacgcggc
cggctgcggtacctgcgggtgctcgtctga
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