Archangium gephyra: AA314_08038
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Entry
AA314_08038 CDS
T03948
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
age
Archangium gephyra
Pathway
age03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
age00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA314_08038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
age03021
]
AA314_08038
03019 Messenger RNA biogenesis [BR:
age03019
]
AA314_08038
Transcription machinery [BR:
age03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AA314_08038
Messenger RNA biogenesis [BR:
age03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AA314_08038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
S1CSD-TOTE-2
AAA_22
NACHT
OB_RNB
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AKJ06412
UniProt:
A0AAC8QET3
LinkDB
All DBs
Position
complement(10052494..10054113)
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AA seq
539 aa
AA seq
DB search
MAKARSPKEKLLVPVEAEDKPKRRTTRAKPADRDDTDKPARRRATSRREEDTDTEAESPA
VAETPRPVLTPMPSHPLRDEEYQEVRAHAVHDEEPAAQPAASEPAETPVVTEVTRDGAPM
QVIKLNDLKRMKITDLAKMAHDFGVEGYQGLKKQDLIFSLLSGIADKKFEVHAEGVMELL
SDGFGFLRSADSDYQPSPDDIYVSPSQVRRFNLRPGDTVTGPIRQPREGERFFALQKVDR
VNFTDPLSEAARERILFDNLTPLYPTRKLKLEHEGSEMTTRIIDMFCPIGLGQRCLIVAP
PKAGKTVLLQNIAHAISKNHPDVYLIVLLVDERPEEVTDMERNVRGEVVSSTFDEPATRH
VQVAEMVIDKAKRLVEQKYDVCILLDSITRLARAYNTVVPASGKILSGGVDANALHKPKR
FFGAARNIEEGGSLTIIGTALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLMEKRIFPTLD
INKSGTRKEELLLPASDLIRITALRQVLHPFTPIDAMEFVLKHMRSTASNTEFLGSMNR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcccgttcccccaaagagaagctcctggttcccgtcgaagccgaggacaag
cccaagcgtcgcacgacgcgggcgaagcccgcggaccgggacgacaccgacaagccggcg
cgccgccgggcgacgagccgtcgggaggaggacaccgacaccgaggccgagtctcccgcc
gtggccgagacgccgcgcccggtgctgacgccgatgccctcccaccctctgagagacgag
gagtaccaggaggtccgcgcccacgccgtgcacgacgaggagcccgccgcgcagcccgcg
gcttccgagccggccgagacgcccgtggtcaccgaggtgacgcgcgacggcgctcccatg
caggtcatcaagctcaatgacctgaagcggatgaagatcaccgacctggcgaagatggcc
cacgacttcggggtcgagggctaccagggcctgaagaagcaggatctcatcttctcgctg
ctgtcgggcatcgcggacaagaagttcgaggtgcacgccgagggcgtgatggagctgctc
agcgacggcttcggcttcctgcgcagcgcggacagcgactaccagccgagcccggacgac
atctacgtgtcgccgtcgcaggtgcgccgcttcaacctgcggccgggcgacacggtgacg
ggccccatccgccagccgcgcgagggcgagcgcttcttcgcgctgcagaaggtggaccgg
gtcaacttcacggatccgctgtccgaggcggcccgcgagcgcatcctcttcgacaacctc
acgccgctctatccgacccgcaagctcaagctggagcacgagggctcggagatgaccacg
cgcatcatcgacatgttctgccccatcggtctgggccagcgctgcctgatcgtcgcgccg
cccaaggccggtaagacggtgctgctgcagaacatcgcgcacgccatctcgaagaaccac
ccggacgtctacctgattgtcctcctggtggacgagcgccccgaggaagtgacggacatg
gagcgcaacgtgcgcggcgaggtggtgagctccaccttcgacgagccggccacgcgtcac
gtgcaggtggcggagatggtcatcgacaaggccaagcgcctggtcgagcagaagtacgac
gtgtgcatcctcctggactccatcacccgtctggcgcgcgcctacaacacggtggtgccg
gcctcgggcaagattctctccggcggtgtggacgccaacgcgctgcacaagcccaagcgc
ttcttcggcgccgcgcgcaacatcgaggaggggggcagcctcaccatcatcggcaccgcg
ctcatcgacaccggcagccgcatggacgaggtcatcttcgaggagttcaagggcaccggt
aactcggaaatcgtcctggatcgcaagctgatggagaagcgcatcttcccgacgctggac
atcaacaagtccggtacgcgcaaggaagagctgctgctgcccgcctcggacctcatccgg
atcacggcgctgcgtcaggtgctgcacccgttcacgccgatcgacgcgatggagttcgtg
ctcaagcacatgcgttcgaccgcgtcgaacacggagttcctgggctcgatgaaccggtag
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