KEGG   Arthrobacter gengyunqii: MUG94_01595
Entry
MUG94_01595       CDS       T08980                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ageg  Arthrobacter gengyunqii
Brite
KEGG Orthology (KO) [BR:ageg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ageg03400]
    MUG94_01595
Enzymes [BR:ageg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MUG94_01595
    5.6.2.6  RNA 3'-5' helicase
     MUG94_01595
DNA repair and recombination proteins [BR:ageg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MUG94_01595
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C AlkZ-like ResIII DUF6406 PhoH
Other DBs
NCBI-ProteinID: UOY96515
LinkDB
Position
complement(319805..324946)
AA seq 1713 aa
MTSGASVLQKFTPATREWFEGAFAAPTPAQTGAWDAISKGANALVVAPTGSGKTLAAFLW
ALDSFIASAAATGTIAQPVPADGVTAPGRKKNTAPKRKTKVLYISPLKALGVDVERNLRS
PLIGITQTAKRLGLPTPSITVGVRSGDTPQNERRTLLTRPPDILITTPESLFLMLTSRAR
ETLAEVETVIVDEVHAVAGTKRGAHLAVTLARLDAMLPKPVQRIGLSATVEPHETVARFL
GGNAPVQIVAPAAKKSWDLTVTVPVEDMSDLGGTPAAEDTVEGGYAPQASIWPHVEEKIV
DLIETNRSTIVFANSRRLAERLTARLNEIHAYRQEAAALSMTATGMEGANAAVGTAADDD
TAEAVLTGAGSAPSAAAVSAPSAEATGSGGSAAAGGSAASAGAAALPTARPPAQLMAQAG
VSIRYRQPDEIAVAVDDDNPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVATSSLELGI
DMGAVDLVIQVESPPSVASGLQRVGRAGHQVGETSQGVMFPKHRGDLLNTAVVAERMLAG
QIEPLYIPANPLDILAQQTVAASALGSIDVEEWFDVVRQSAPFAGLPRSAFDATLDLLAG
RYPSDEFAELRPRIVWDRSEGTITGRPGAQRLAVTSGGTIPDRGLFGVYLVGDSEGKNSR
RVGELDEEMVYESRVGDVFALGATSWRIEDITHDRVLVSPAFGQPGKLPFWRGDSLGRPV
ELGRALGGFVRELSGADDDTAAKRLAAVGLDAWAAGNLMTYLREQQQATDVVPNDRSLVV
ERFHDELGDWRVVLHSPYGMPVHAPWALAVGARLHQRYGLDGSAMASDDGIVLRVPLMED
EPPGAELFIFDADELDSIVTAEVGGSALFASRFRECAARALLLPRQNPGKRTPLWQQRQR
SAQLLDVAKKYPTFPIVLETVRECLQDVYDLPALKDIASGIERREIRLVETTTPSPSPFA
RSLLFGYVGAFLYEGDSPLAERRAAALSLDPTLLNELLGRAELRELLDARIIAQTERELQ
RLADDRRVRGVEGVADLLRLLGPLTVPEVAGRLQPGESEQTATTATATTASAPSTIAAAV
HDAPGSEVAGDEAPGTDAAGPASSGASSEYALELLEQLVRSNRALKVGVAGQQRYAAIED
AARLRDALGVPLPMGVPLAFIEPVADPLGDLIGRYARTHGPFTAAEAATRLGLGVAVVTT
TLQRLAGEGRVVEGEFRPAETQILDAAAGVDQTPGAVITVPGAPAGTEWCDVEVLRRLRR
RSLAALRSEVEPVEPATYARFLPVWQNVGSSLRGLDGVATVIDQLSGVPIPASAWEPLIL
GSRVRNYAPAMLDELTATGEVLWSGTGSLPGNDGWISLHLAENAPLTLNPAPDFVPSDVQ
QHLLDLLSGGGAYFFRQLADGLAAKDAESSDANIVSALWDLVWAGRISNDTFTPVRSLLA
GGKTAHKQRAATPRARTARLGRLGRAPGASLTGSSMRLAAGGNQPTALRNAPPLVAGRWS
MLPEVERDTTIHAHATAELLLDRYGVVTRGSVASEGTPGGFALLYRVLARLEEMGRCRRG
YFIEQLGAAQFAVPATVDRLRSFSEDSQLRKPEPSAVALAATDPANPFGAALPWPTLDGG
HRPGRKAGALVVLVDGNLALYAERGGKTLLTFTEDPAVLELSAAALVDIIRRGAAEKMAI
EKVNGQEILDTDAARALTHAGFYTTPKGLRYRV
NT seq 5142 nt   +upstreamnt  +downstreamnt
atgacatcgggagcttcggtgctgcagaaattcacccccgccaccagggagtggttcgag
ggtgccttcgccgcgccgacacctgcacaaaccggagcatgggacgccatttcaaagggt
gcaaacgcattggtggtggcgcccaccgggtcgggcaaaaccttggctgccttcctgtgg
gctttggacagttttatcgcttcggcagctgccaccggcaccatcgcgcaacccgttccg
gcagacggcgtcacagcacccggacgcaagaaaaacactgcacccaaacgcaagaccaaa
gttctgtacatctcgccgctgaaagccctcggcgttgatgtggagcggaacctgcgctcc
cccttgatcggcattacccagacggccaaacggctgggactgccgacaccgtccattacc
gtcggagtccgctcgggagacacaccccagaacgagcgccggacgctgctcacacggccg
ccggacatcctcatcacgacgccggaatcactgttcctcatgctgacgtcccgcgcccgg
gaaaccttggccgaggtggagaccgtcatcgtcgacgaggtgcacgcagttgccggcacc
aagcgcggtgcacatctggcagtcaccttggcccgtttggatgcgatgcttcccaaaccg
gtccagcggatcggattgtccgcaacggtggagccccatgagacagtcgcccggttcctg
ggcggtaacgctccggtgcagatcgtggctccggcagcaaagaaatcctgggacctcact
gtgacagttcctgtcgaggacatgtccgatctgggcggcactcccgccgcggaagacacc
gttgagggcggatacgcgccgcaggcgagcatttggccgcacgtcgaggaaaaaatcgtc
gacctcatcgagacgaaccgctccaccatcgtgttcgccaattcccgccggctggcagaa
cggctgacggcaaggctcaacgaaatccatgcctaccggcaggaagccgctgccctgtca
atgaccgcaaccggcatggagggtgccaacgccgctgtaggcaccgcggccgacgacgac
accgctgaggctgtcttgacgggcgccggttccgcgccgtccgccgctgctgtatccgca
ccttccgccgaggccaccggttccggcgggtccgccgcagcaggaggctccgctgcttcc
gccggagctgcggccctgccgacagcgcgtccgcccgcacaactcatggcacaggcaggc
gtgtcgatccgctaccgccagccggacgagatcgcggtcgcggtcgacgacgacaacccg
gttctggcccgggcccaccacggctcagtgtccaaagaccagcgggccctcatcgaggat
gacctgaaatccgggcggcttcgctgcgtcgtggccacgagctcgttggaactgggcatc
gacatgggagccgtggacctggtcatccaggtcgaatccccgccgtcagtggccagcggc
ctgcagcgggtggggcgtgctggacaccaggtcggcgagacgtcccagggtgtcatgttc
cccaagcaccgcggagacctgctgaatacggcggtggttgccgaacggatgctggccggt
cagattgagccgctgtacatacccgccaatcccctcgacatccttgcccagcaaacggtc
gccgcgtccgcactcggctccatcgacgtggaggaatggttcgacgtcgtccgccaatcc
gcaccgttcgcgggcctgccccgttccgcttttgacgcaacccttgacctgctggccggc
cgttatccgtccgacgaattcgcggagctgcggccgcgcattgtctgggaccgctccgaa
ggcaccatcaccgggcggcccggcgcgcagcggctggccgtgacctccggcggcaccatt
ccggaccggggactgttcggcgtgtatctggtgggcgattccgagggcaagaacagccgc
cgcgtcggtgaacttgatgaggaaatggtctacgaatcccgggtgggtgacgtctttgcg
ctcggcgccaccagctggcggattgaagacatcacccacgaccgggtgctcgtttcccct
gcgttcgggcagcccggaaagctgccgttctggcggggggattccctcggccggccggtg
gaactgggccgggcgctgggcgggtttgtccgtgaactgtccggcgccgatgatgacacc
gcagccaagcggctggccgccgtcggtctcgacgcctgggctgccggcaacctgatgacc
tatctgcgggaacagcagcaggccaccgatgtggtgcccaatgacaggtcgctggtggtg
gagcgtttccacgacgagctcggcgattggcgggtggtcctgcacagtccgtacggaatg
ccggtgcacgctccctgggctctcgccgtcggcgcccggctccaccagcgctacgggctg
gacggatcggccatggcctccgatgacggcatcgtgctgcgggtgcccctgatggaggac
gaaccgccgggggctgagttgttcatcttcgacgcggatgagctcgactcaatcgtgacc
gcagaggtgggcggatcggccctgttcgcctcgcgtttccgtgaatgcgccgcgcgtgcc
ctgctgctgccgcggcagaatcccggaaaacggacgccgctgtggcagcagcgtcagcgg
tccgcacagttgctggacgtcgccaaaaagtacccgacgttccccatcgtgctcgagacc
gtgcgcgaatgcctccaagatgtctacgacctgcccgccctgaaagacattgcctccggg
atcgagcgccgtgaaatccggctggtggagaccaccactccctcgccgtcgccctttgcc
cggtccctgctcttcggctacgtcggcgctttcctgtatgagggtgactctccgctggcg
gaacggcgtgcggctgccctgtctctggatccgaccctgctcaatgagctgctcggccgg
gcggagctgcgtgaactgctggatgcccgcatcatcgcccagaccgaacgagagctgcag
cggttggccgatgatcgtcgggttcggggcgttgaaggcgttgcggacctgctgcggctg
ctgggtccgctgaccgttcccgaggtcgcgggccgcctgcagcccggggagtcggagcag
acggcgacgacggccacggcgacgacggcaagcgcgccaagtaccatcgccgccgctgtg
cacgacgctcccggaagcgaggttgccggcgacgaggcgcccggaacggacgctgccgga
cctgcctcatccggagcatcgtccgagtatgccctcgagctgcttgagcagctggtccgg
tccaaccgggcgctgaaggtcggcgtcgccggacagcagcgctacgcggccatcgaggac
gccgcccgcctgcgcgatgctttgggtgtgccgttgccgatgggtgtccctctggccttc
atcgaaccggtggctgatcccctgggtgacctgattggccgctacgcacgcacccacggc
ccctttaccgccgcggaagccgcaacgcggctgggactgggcgtcgccgtcgtaaccacc
accttgcagcggctggccggtgaagggcgcgttgttgaaggtgagttccgcccggccgaa
acccaaatcctggacgctgcggccggcgtggaccaaacacccggcgcggtcatcaccgtt
cccggtgcgcctgccggcactgaatggtgcgacgttgaggtgctgcgccgcctgcgcagg
cgctccctcgccgccctgcgttccgaagtggagccggtggaaccggcaacctatgcccgt
ttcctgccggtctggcagaacgtgggctcctcgctccgcgggctcgacggcgttgccacc
gtgatcgaccagctctccggcgtgcccatccccgcttccgcctgggaacccctcattctc
gggtcccgggttcggaactacgcccctgccatgctggacgaactcaccgcaacgggtgag
gtcctttggtccggaaccggttcccttccgggaaacgatggctggatttccctccatctg
gccgaaaatgcacccctgacactgaacccggccccggatttcgttccgtcggatgtgcag
cagcacctgctcgatctgttgtccggcggcggcgcatacttcttccggcaactggccgat
ggactggctgcgaaggacgccgagtcctccgacgcgaacatcgtcagcgccctgtgggat
ttggtgtgggcgggaagaatcagcaacgacaccttcactcccgtccgttccctgctagct
ggcggcaaaacggcgcacaaacagcgggcagcaacaccccgcgcccggaccgcgcgactg
ggacggctgggccgggcaccgggagcctccctcaccggaagctccatgcgtcttgcggcc
ggcggcaaccagcccaccgccctgcgaaacgctcctcccctcgtcgccgggcgctggagc
atgctgcccgaggtggaacgggacaccaccatccacgcccatgccacggccgaactgctg
ctggaccgctacggggttgtcacccgggggtcagtggccagcgagggaacaccgggcggt
ttcgccctgctgtaccgggtgctggcccgactggaggaaatgggccgctgccgccgcgga
tacttcattgaacaactcggggcggcgcagtttgccgttcccgccacggtggaccggctg
cgctcattctccgaggattcacagctgcggaaaccggaaccgtcagcggtggccctggcc
gccaccgatccggcgaatccgtttggtgctgccctgccgtggccaacgctggacggcggc
caccggccaggacggaaagcgggtgccctcgtggtgctggtggacggaaacctcgctctc
tacgccgaacgcggcgggaaaacactgctgaccttcacggaagatccggcggtgctcgag
ctttccgccgccgctctggtggacatcattcgccgcggtgccgcggaaaagatggccatc
gaaaaagtcaacgggcaggaaatcctggacaccgatgctgcccgggccctcacgcacgcc
ggtttctacaccacgccgaagggattgcgttaccgtgtctga

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