Astur gentilis (Northern goshawk): 126034107
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Entry
126034107 CDS
T08649
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03430
Mismatch repair
agen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126034107
03460 Fanconi anemia pathway
126034107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agen03400
]
126034107
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
126034107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
126034107
NCBI-ProteinID:
XP_049647343
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Position
33:12462583..12476073
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AA seq
878 aa
AA seq
DB search
MEEAAAPGLQPAKAIKPIDRKSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKD
HGAELIEVSDNGDGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDV
TIFTCHKSAKVGTRLVFDHNGKITQKTPFPRQQGTTVNIQQLFYTLPVRHKEFQRNIKKE
YAKMVQVLQAYCIVSKGVRINCTNQVGQGKKSSVVSTTGSPSLKENIGAVFGQKQLQSLL
PFVQLPPNEAVCEEYGLNTTDMPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPA
KVVKLVNEVYHLYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLM
EMFGSDVNKLNVNHKLLDIAGNLKKTLPEETEKPQVEMLPDSETENPSGEGKRIMTLARL
RESFSLHQVTESNFQSPKKVKQQHSSSRQMSLDTTLSTVKTQKAVLSNESESCHKMDSKM
SIPRRYLRKLEDNADSGFCSTSESDAACSTPEAGTCVSTESVINPPEEEFCSSEEQFQNE
CLKTVGCSEKSLERNVQVLGAEHKLNQVNDWTNQNKFSQEANSSSPRVKCFKSRSFRSEA
DDFKAGKCPEVKNTGNYMPSVDVLVEVKKKTVPLEFSMKVLAEKVKNVIQQQQKSTETQN
YRRFKAKISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATD
EKYNFEMLQQHTVLQGQKLIAPQNLNLTAVNETVLIENVEIFRKNGFDFVIDENAPVTQR
VKLISLPTSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNV
QEMRKLVTHMGEIEHPWNCPHGRPTMRHIVSLDLISPE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcggcggcgcccggcctgcagcctgccaaagccatcaagcccatcgaccgt
aagtccgttcatcggatctgttccggacaggttgtgctgaatcttggtactgccgtgaaa
gagttggtggaaaacagcctggatgctggagctaccaacatcgatataaaacttaaagat
catggagcagaactgatagaggtttcagataatggagatggagtggaagaggaaaacttc
gaaggcttgactctgaaacattatacatcaaagatacaagatttttctgatctaatacat
gttgaaacatttgggtttcgaggtgaagctctgagttcactgtgtgcattaagcgatgtt
accatttttacctgtcataagtctgcaaaggttgggactcgtttggtatttgatcacaat
ggtaaaattactcaaaaaactccttttccacgacagcaaggaacaactgttaacatacag
cagttattttatactttgccggtgcggcataaggaatttcaaagaaacattaaaaaggaa
tatgcaaaaatggtccaggtattgcaggcatactgtattgtttcaaaaggagtgcggatt
aactgcactaatcaagttggccaagggaaaaaaagctctgtggtatcaactactggaagt
cctagtttaaaggaaaatattggagcagtgtttgggcaaaaacagttacagagcctcctt
ccttttgttcagctacctcctaatgaagctgtttgtgaagaatatggactcaacactact
gacatgccacaaaatctttacagtattacaggcttcatttctcgttgtgatcatggtgtt
gggaggagtacaacagacagacagtttttctttatcaaccaacgtccatgtgatccagca
aaggttgtcaaacttgtgaatgaagtttatcacttatacaataaacaccagtatccattt
gttgtccttaacatttgtgtagattctgagtgtgttgacatcaatgtaactccagacaaa
aggcaaattttacttcaggaggaaaaacttctattagcaattttaaaaacttctctgatg
gagatgtttggtagtgatgttaacaaactgaatgtcaatcacaaacttttggacattgca
ggcaacttgaagaagacacttcctgaagagacagaaaagcctcaggtagaaatgttgcct
gactctgagactgaaaatccaagtggtgaaggaaaaagaataatgactcttgccagatta
agggagtcgttctctctccatcaagtgacagagagtaattttcaaagccctaaaaaagta
aaacagcagcacagctcctctagacaaatgtcacttgataccactttgagtactgtaaag
actcagaaggctgtcttgagtaacgagtctgagagctgtcataagatggactcaaagatg
tcaattccacgcagatatctgagaaaattagaagataatgcagattctggattctgtagc
acttctgagtcagatgccgcatgtagtacaccagaagctgggacctgtgtcagtacagaa
agtgtaattaatcctcctgaagaagaattctgtagctcagaagaacaatttcaaaatgaa
tgtcttaaaactgttggatgtagtgagaaatcattggaacgtaatgttcaggtcttgggt
gctgaacataagttaaatcaagtgaatgactggactaatcaaaataagttttctcaagaa
gccaatagttcttccccaagagtaaaatgttttaaaagcaggagctttagaagtgaagca
gatgacttcaaggcaggtaaatgtcctgaagtgaagaatactgggaactatatgccaagt
gttgatgtactggtggaagttaaaaagaaaaccgtgccacttgaattctcaatgaaggtc
ttggcagaaaaggtaaaaaatgtaatacagcaacaacagaaaagtacagaaacacaaaat
tacagaagatttaaagcaaaaattagtcctggagaaaataaagtagcagaagatgaatta
agaaaagagatcagtaaagaaatgtttgcgaaaatggaaatcattggccagttcaattta
gggtttataatagcaaagttgaattctgatcttttcataattgaccaacatgctaccgat
gagaagtacaactttgagatgttacaacaacacactgttcttcaaggtcagaagctgata
gcgcctcagaatctcaatttaacagctgtaaatgaaactgtattgattgaaaatgtggaa
atattcagaaaaaatgggtttgattttgtcatagatgaaaatgctcctgtaactcaaaga
gttaaactaatatcgctgccaacaagcaaaaactggacttttggtccacaagacatagat
gagctgatcttcatgttaagtgactgccctggagtcatgtgtaggccctccagggtcaga
cagatgtttgcttctcgagcttgcagaaagtctgtgatgattggaactgcgctgaatgtg
caggaaatgagaaaactggtcactcatatgggtgagattgagcatccctggaactgcccc
catggaaggcctactatgagacacatcgtcagtttagacttgatttcaccagaataa
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