Astur gentilis (Northern goshawk): 126034320
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Entry
126034320 CDS
T08649
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03440
Homologous recombination
agen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126034320
03460 Fanconi anemia pathway
126034320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agen03400
]
126034320
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
126034320
FA (Fanconi anemia) pathway
Downstream FA components
126034320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Phage_Cox
Motif
Other DBs
NCBI-GeneID:
126034320
NCBI-ProteinID:
XP_049647852
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All DBs
Position
33:complement(20075807..20086386)
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AA seq
1334 aa
AA seq
DB search
MEGPAGGGEALSGAEKEKLREKLALLRREYSETVSRLRRARRAERARSHGRGTAADGGRR
ERSPAGSRDNVSPSADKHETSQLHTKTCFDLGTEKKMSVTFKHVPEFSNNEVSLQDGSRA
ESIQASQEDLCCGIVRPAPAEKKTQTSRSLMKLRRRTKALVSEEREAVRDVYLINADETV
KNQIASTEELRSPVFRRSGLSSTEENARRASRPALVQREENSSTPPNAALGVVQEMLEDG
VPPGVPELFPCALSDSSDVWQPESPSAVATSGNCEPAWLCSGNSDSVLLDTSGDGGTESS
CVIKQMDGESMAEDQGALHRLLDLMSENEVLPTGGNNDIINDSKSHEGDQSDTNSLNLFP
TDLALGNAEELLENQQLEIQSKLSHPERVTTPESTLNSCTVVEGLLFPVEYYVRTTRRMS
NCQRKVDLDAVILSQLGRSKKGQRSKCKQKDASSGRYSQERVENGLESGVTPFPFLGAEN
DPANSSSRQKPLPASSGSSTSLGSISQNSIASTKGDQRQSQRKQKGRRKSTCKPTVHQVS
QELIGSLDLTTRESSSLLSNECQSEKENCEASLEKSSSDERRLSAAAALGSGETEVTGAI
QPMSTDPPPGGSQVLGKCRKSLLEQVQNPLQNSDPLNPGNEAFASRIGDLEANLTVREAG
KHPVEHVKDPQAQGARRAEELLAINVPLRRSLRSSARQRATQVSKDESKRGCSYPVGSES
PASLGLPAMGTDTCSSPFSFRSLQWLAPRLGITDFYLPDEEFGLLKLEKLESSPVNDLEA
FVPSVFGDGVASEDAQDAQMNPEEKSLESNLILPFKNRLPKLPHVESPASKKELYTHELL
FTPMGTVLAGAPTQPESLISSSVFPVVGATPAVLPSVCSEVFPNTPSVPPLQASPHSSKG
ASAQFVDYEKCKDSAIPLHLDSCGAGSARKEEEQGTAFPLEAERGPDKSDEAVALDKHQQ
LESKQQRSCRASPEQEKDVAEQLTPVLLDGLREETLQLESKLEDSSSSCAVDVSTMWWEA
AGCRELCVVTACESSVSLWKPLASDCWGKVYTWQLGEIPVIQIVPLPDTCNLVCIALGDL
EIGEIRLLLYSSENDSFKQSLVKTGNIKAVLGLKDRRLVSSSRTVQEQQVEIVSFSETRR
SKDGQTLMPPEETVLAFAEVEGMRDALLGTTAVNSIVVWNLKTGQLLKKMHVGYSYPASI
CHRAYSDSGLLFVVLSHPHAKESESCGNPAFRVIAFNPKTARSTGVMFSSLPPGHAGRYL
EGDVKDASAAAVLTSGAVAVWDLLLGRCTALLPPPPAGSWALARWATTGACLLAGQRDGT
VCLYRYRQPQPGAA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccggcgggcggcggggaggccctcagtggcgccgagaaggagaagctgagg
gagaagctggcgctgctgaggagggagtacagcgagaccgtcagccggctgcggcgggcg
cggcgagccgagcgagccaggagccacggccggggcacggcggcggacggaggccggcgg
gagcggagccccgcaggttctagagataacgtatctcctagtgctgacaaacatgaaacc
tctcagttacacactaaaacctgctttgatctcggcacagagaagaaaatgtctgtcaca
tttaaacacgttcccgaattctccaacaatgaggttagcctgcaggatggctcacgggca
gaaagcatacaggctagccaggaagacctgtgctgtggaatcgttaggcctgcccctgcg
gagaaaaaaacccaaacctccagaagcttgatgaagctgaggagacggacgaaggctctg
gtgtctgaggaaagggaagcagtgcgtgatgtctatctaatcaatgccgatgaaacggtg
aaaaatcaaattgccagtacagaggaacttcggtcaccagtcttcaggcgaagcggcctc
tcgagcactgaggaaaacgctcgaagagcatccagaccagctcttgtgcagagagaagaa
aacagttccactcctcccaatgcagcattaggagttgtacaagagatgcttgaagacggt
gtccctccaggagtgcctgagctgttcccgtgtgcactgagtgacagcagtgatgtctgg
cagcctgagtccccaagtgctgtggccacatctggtaactgtgagcctgcatggctgtgt
tccgggaacagcgactctgttttactggacaccagtggtgacggaggaacagaatcctcc
tgtgtaataaaacaaatggacggtgagagtatggctgaagatcagggagcattacatagg
ctcttggatttaatgtcagaaaatgaagtattgcccactggtggaaataacgatataatt
aacgacagcaaaagccatgaaggagatcaaagtgacactaatagcttaaatctctttcct
acagatcttgctctgggcaatgctgaagaactgttggagaatcaacagcttgaaattcag
tcaaaactttctcacccagaaagggtgactactcctgaaagcacactgaactcttgcaca
gtggttgaagggcttctctttccggttgaatactacgtcaggacaactcgacgcatgtct
aattgtcaaaggaaagtggacctcgatgctgtaattcttagccagctgggcagaagcaag
aaaggtcagcgaagtaagtgcaagcagaaggatgcaagttcaggtcggtactcccaagaa
agagttgaaaatggtttggagtcaggggtcacgccgttcccttttcttggtgcagaaaat
gatccagcaaattcaagtagtcgtcagaaacctcttcctgcgtccagtggtagcagcact
tcccttggatcaatttctcaaaatagcatcgctagcacaaagggagatcagagacaatca
cagaggaaacaaaagggaagaagaaagtctacctgcaaacccactgtgcatcaagtgtca
caggaacttatagggagtttggatctcacaacgagggaaagcagtagtctgctgtcaaat
gagtgtcagagtgaaaaggaaaactgtgaggctagtcttgaaaaatcatcttcagatgag
agaaggttgtctgctgctgctgctcttgggtctggagagacagaagtgactggtgctata
caaccaatgagtactgatcctcctcctggtggaagccaagtgcttggcaaatgccgtaag
agtctgttagaacaggttcaaaatcctcttcagaacagcgatcctctgaacccagggaat
gaagcttttgctagccgtataggagatctggaagccaacttaactgtgcgtgaggctggt
aaacatccagtggagcatgttaaggatccgcaagcgcaaggagcccgcagggctgaggag
cttctagcgattaatgtccctctgcgccgctccctgcgttcctcagcgagacagagagcc
actcaagtctcaaaagatgagagcaaaagaggatgtagctatccagtgggttcagagagt
cctgcttctcttggcctccctgctatgggcaccgatacttgcagctctcccttctccttc
cgcagtctccagtggctggcccccagactgggtatcacagacttttacttgcccgatgag
gaatttggactactgaaacttgagaaattagaatcttcccctgtgaatgacttggaggct
tttgttcctagtgtgtttggagatggtgtggcttcagaggatgcacaagatgcacaaatg
aatccagaagaaaaaagtctcgaaagtaatttgattttgcctttcaaaaatagattgccc
aagttacctcatgtagaaagcccagcttccaagaaagaactttacacccatgaattgcta
tttactcccatggggactgtcttagctggtgctcccactcagcctgagtctctgatttcc
tcatctgttttccctgtcgtgggtgcaaccccagctgttttaccatcagtatgcagtgag
gtcttccccaacacaccttctgtacctcccttgcaagcgagcccgcactcctccaaaggc
gcatctgcccagtttgtggattatgagaaatgcaaagactctgccattccactgcacttg
gacagctgtggtgcgggatctgctagaaaagaggaggaacaaggtacagcgtttccctta
gaagctgaaagaggtcctgataaatctgatgaggctgtggccttggacaagcatcagcag
ttggagagcaaacagcagagatcctgcagagcttctcctgaacaggaaaaagatgtagcg
gaacagctgactccagtattgctcgatggcctgagagaagagaccttgcagcttgaatca
aagctagaggattcttcaagttcctgtgctgtggatgtgagtaccatgtggtgggaagca
gctggctgcagagagctgtgcgtggtgactgcttgtgagagttccgtctccctgtggaaa
ccgctggcatctgactgctggggaaaggtctatacttggcagctcggagagattcctgta
atacagattgttcctctgccggacacctgtaatcttgtgtgtatagcattgggagatttg
gagattggagaaataaggctcttgctttattcttctgagaatgactcattcaagcaatca
ctagtaaaaactggaaatataaaagctgttcttgggctaaaggataggaggctggtcagc
agcagtaggaccgtgcaagagcagcaagtggagatagtatcattttcagagacccgaagg
agcaaggacggacagactttgatgccccccgaagaaaccgttttagcttttgctgaagta
gaaggaatgagagatgccttgcttggcaccactgcagtgaacagcattgttgtttggaat
ctgaaaacaggccagctcctgaagaagatgcacgttggttattcctacccagcttccatc
tgccatcgagcgtattctgactctggccttctgtttgttgttttaagtcatccacatgcc
aaagagagtgagtcctgtggaaaccccgcattccgtgtgatagcgttcaaccccaaaaca
gccaggagcacgggagtgatgttctcctccctcccacctgggcatgctggaaggtacctg
gagggtgacgtgaaggacgcttcggccgcagccgtgctgacatcgggagccgtggccgtg
tgggacctgctcctggggcggtgcacggccctgctgcccccaccgccggcggggagctgg
gcgctggcccgctgggccaccaccggcgcctgcctgctggccgggcagcgggacgggacg
gtctgcctctaccggtaccggcagccccagccaggagcggcttga
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