Astur gentilis (Northern goshawk): 126035830
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Entry
126035830 CDS
T08649
Name
(RefSeq) LOW QUALITY PROTEIN: 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agen03041
]
126035830
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126035830
Spliceosome [BR:
agen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126035830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltrans
OB_NTP_bind
HA2_C
Helicase_C
R3H
HA2_N
DEAD
nSTAND3
Ank_2
AAA_19
PhoH
ATPase
AAA_7
AAA_22
SRP54
T2SSE
Motif
Other DBs
NCBI-GeneID:
126035830
NCBI-ProteinID:
XP_049650779
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Position
Z:complement(24592584..24648027)
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AA seq
1303 aa
AA seq
DB search
MSRPSSVSSRPSSVSSRPSSVSSRPSSVSSRQPGGGLASASSAAAASASSAAASSSAAAA
SASSAAAAASAASAGPAAGRGKRLKDIRVDEEVEIAVNLALERFRYGEEKEMEFPSSFTS
TERAFVHRLCQSLGLVSKSKGKGANRYLTVRKKDVSEPTHAVMTCSLAPSTKHTIRSLIQ
RFPVTNKERTELLPKTERGNACAVESENRDVNKASGRLNNGIPQVPVKRGESEFDSFRQS
LPVFEKQEEIIKIIKDNKVVLVVGETGSGKTTQIPQFLLDECYKNRTPCRIFCTQPRRLA
AVGVAERVAAERREKVGQTVGYQIRLESRVSPKTLLTFCTNGILLRTLMVGDSALSTVTH
IIVTEKDANCLEPWLIKEMDSCLSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETNATE
ALKLPEALMIASGRGFLSQVEQLISMGASIHCKSSNGWVALDWAKRFRQTEVVDLLESYS
ASVEFGNLNESSLVQISGSDLSAEDRELLNAYHHSFDDEKVDLDLIMHLLYSICHSCDAG
AILVFLPGYDEIVSLRDRILFDDKRFADNAHRYQVFMLHSNMQTLDQKKVLKSPPSGVSK
IILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKMVWISKASAIQRKGRAGRC
QPGVCFHLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPINCPIVDFLMKAPDPPPA
LIVRNAVQMLKTIDAMDPWEDLTELGYHLTELPVEPHLGKMVLCAVVLKCLDPILTIACT
LAYRDPFVLPTLASQKRAAMLCRKRFTAGTFSDHMVLLRAFQAWQKARSDGWERAFCEKN
FLSQARMEIIIGMRTQLLGQLRASGFVRSRGGVDIRDVNTNSENWAVVKAALVAGMYPNL
VHVDRESLVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRA
HRIANIRCCSVVTPVTVSLFCGPARLPSNALQEPSSFRGDGVSNDNSDSEMEDKTMANLA
LLKLDEWLHLKVDPEGPGVFHPYDSGHIAMTYTGLSCLVILGDDLSRVNKDAILAGLRAL
QLEDGSFCAVLEGSENDMRFVYCASCICYMLNNWSGMDMKKAIDYIRRSRSYDNGLAQGA
GLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIRRWCIMRQQNGYHGRPNKPVDTCYSF
WVGATLKLLNIFEYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLIGE
PGICQVHPALNVSTRTTERLHQLHQIWKXKDSKQCSDNTHVST
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcccagtagcgtctcgtcgcggcccagtagcgtctcgtcgcggcccagtagc
gtctcgtcgcggcccagtagcgtctcgtcgcggcagcctggcgggggcttggcctcggcc
tcctccgcggccgcggcctcggcctcctccgccgcggcctcctcctccgcggccgcggcc
tcggcctcctccgccgccgccgcggcctccgccgcctccgccggccccgcggcgggccgc
ggcaagaggctgaaggatatccgcgtcgacgaggaggtggagatcgcggtgaacctcgcc
ctggagcggttccggtacggagaggagaaagaaatggagtttccttcctccttcactagc
accgaaagagcattcgttcaccggctgtgtcagtctctcggactggtatccaaaagcaaa
gggaaaggagcaaatcgatacctgactgtaaggaagaaggatgtatcagaaccaacacat
gcagtaatgacttgcagcttggctcccagtacgaaacataccattcggagtttaattcag
agatttcctgtcacaaataaagaacgaacagaacttctgccaaagacggagcgaggaaat
gcatgtgctgttgaatctgaaaacagagatgtgaacaaggcaagtggacggcttaacaat
ggtatcccccaggttccagtgaaaagaggggaatcggagtttgattccttcaggcaatcc
ctaccagtttttgagaaacaggaagaaattatcaaaataataaaggacaataaagttgtt
ttggttgtaggagagactggatcaggaaaaactactcaaatccctcagttccttcttgac
gaatgttacaaaaacagaactccgtgtcgtatattttgcactcagccaagacgtttggca
gctgttggtgtggctgaaagagtggcagcagaaagaagagaaaaggttggccagacagtt
ggttaccagatccgattagaaagcagggtttctccaaagacactgctaacgttttgcact
aatggcatactgcttcgcacgctaatggtaggagacagcgctctatcaactgtgacacat
attattgtgactgaaaaagatgcgaattgccttgaaccatggctaataaaagagatggat
tcttgtctttctgacatctggttgcataaagatattgatgcctttgctcaagtgttccat
ctcattttaaccgaaaatgtcagcgttgattataggcacagtgaaaccaatgcaactgaa
gcactgaagctccctgaagcactaatgattgcttcagggagaggatttctgagtcaagta
gaacaactgatcagtatgggagcaagtatccactgcaaatcatccaatggctgggtggct
ttggactgggctaagcgctttagacagacagaggttgttgacctgttggagtcctacagc
gcttcagtggaatttggaaatctgaatgaaagttccctcgtccaaataagtggtagtgac
ctcagtgcagaagacagagaactgttgaatgcttatcatcacagttttgatgatgaaaaa
gtagatctggacctgattatgcacttactttatagcatctgtcatagttgtgatgctgga
gcgattttagtatttcttcctggatatgatgagatagttagcctgagggaccgtattctt
tttgatgacaagagatttgctgataatgctcacagataccaagttttcatgcttcattca
aatatgcagactttggatcagaagaaggtgcttaaaagtccaccttctggcgtcagcaaa
ataattctttctactaatattgcagaaaccagcataacagtcaatgatgttgtatttgtt
attgactcaggcaagatgaaagagaagtcttttgatgcactgagttgtgttacaatgcta
aaaatggtgtggatttcaaaagccagtgctatccagagaaaaggcagggctgggcgctgt
cagccgggagtctgttttcatctcttcagcaggctccgatttcagaatatgttggaattt
cagactccagaacttctgagaatgccacttcaggagctttgtttacacacaaaacttctg
gctccgattaactgtccaattgttgactttcttatgaaagctcctgatcctccaccagct
ttaattgtgagaaatgctgtgcaaatgctgaagacaatagatgcgatggacccttgggaa
gatctcactgaacttggttatcatctcactgaattaccagtagagccacaccttggtaaa
atggtgttgtgtgctgttgttttgaagtgcctggatcctattcttactattgcttgcact
cttgcatatcgagacccttttgtcctacctacactggcctctcaaaagcgtgcagccatg
ctgtgtagaaaacgttttactgcaggaacatttagtgaccatatggtgcttctcagggct
ttccaggcatggcagaaggcgcgcagtgatggctgggagagagcgttctgtgaaaagaac
ttcctgtctcaagcaaggatggagatcattataggaatgagaacacagttgcttggccag
cttagggcctcaggttttgttagaagcagaggaggagtcgatattagagatgttaatact
aattctgaaaactgggctgtagttaaagctgccttagtggctgggatgtatcccaatcta
gtgcatgtagacagagaaagcctggttttgactggaccaaaggagaagaaagtgcgattt
catcctacctctgttcttagtcaacctcagtataaaaagattcccccagcaaatgggcaa
gctgcagccattcaggcactccctacagactggcttatatatgatgaaatgacgagagct
cacaggatagcaaatatcagatgctgttctgttgtaacacctgtcactgtgtcactcttc
tgtggaccagctagattaccaagtaatgctttgcaggagccttcatcctttcgaggggat
ggggtatctaatgataacagtgatagtgagatggaggacaaaacaatggctaatctggca
ctactgaagttagatgaatggctccatctcaaagtggaccctgaaggtccaggtgtattt
catccctatgatagtgggcacatagcaatgacttacacaggtctgtcatgtctggttatt
cttggagatgatttaagtcgagtaaacaaagatgccatactggcaggactgagagctctc
cagctggaggatggaagcttttgtgcagtgctcgaaggaagtgagaatgatatgaggttt
gtgtactgtgcttcctgcatctgctacatgctcaataactggtcaggcatggatatgaaa
aaagcgatagactatattagaagaagtaggtcttatgataatggcctggcacagggagct
ggactggaatctcatggtggctctacattttgtggtattgcatcgctatgtttgatgggt
aaactggaggaagttttttcggaaaaagaactgaacagaataagaagatggtgtataatg
aggcaacagaacggctaccatggacgacccaacaaacctgtagacacttgctattccttt
tgggtgggagcaacattgaagctcttgaatatatttgaatatacaaattttgagaaaaac
cgaaattacatcctgtcaactcaagatcgtcttgttggtggatttgccaagtggccagat
agccatccagatgctttgcatgcctactttgggatctgtggtttgtcgttaattggagaa
cctggtatttgccaagttcatcccgccctgaacgtaagcacaagaaccacagagcgcctt
caccagcttcatcagatctggaaanacaaggactcaaaacagtgttcagacaacacacac
gtctctacgtga
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