Astur gentilis (Northern goshawk): 126035854
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Entry
126035854 CDS
T08649
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agen03041
]
126035854
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126035854
Spliceosome [BR:
agen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126035854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
Helicase_C
HA2_C
R3H
DEAD
Ank_2
HA2_N
AAA_19
nSTAND3
AAA_22
Ank_4
PhoH
ATPase
AAA_7
AAA_16
AAA_23
SRP54
Motif
Other DBs
NCBI-GeneID:
126035854
NCBI-ProteinID:
XP_049650834
LinkDB
All DBs
Position
Z:complement(24459895..24498472)
Genome browser
AA seq
1470 aa
AA seq
DB search
MSRPSSVSSRPSSVSSRPSSVSSRQPGGGLASASSAAAASASSAAASSSAAAASASSAAA
AASAASAGPAAGRGKRLKDIRVDEEVEIAVNLALERFRYGEEKEMEFPSSFTSTERAFVH
RLCQSLGLVSKSKGKGANRYLTVRKKDVSEPTHAVMTCSLAPSTKHTIRSLIQRFPVTNK
ERTELLPKTERGNACAVESENRDVNKASGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQ
EEIIKIIKDNKVVLVVGETGSGKTTQIPQFLLDECYKNRTPCRIFCTQPRRLAAVGVAER
VAAERREKVGQTVGYQIRLESRVSPKTLLTFCTNGILLRTLMVGDSALSTVTHIIVDEVH
ERDRFSDFLLIKLRDVLRKQTNLKLIISSAALDANLFIRYFGSCPVIHIQGRPFEVKEMF
LEDILRSTGYTNKEMIKYKKEKQREEKQQSTLTEWCSAQENNSKVESRRQRSVPSATEEY
NLLDDSGDAVFNQLTEKDANCLEPWLIKEMDSCLSDIWLHKDIDAFAQVFHLILTENVSV
DYRHSETSATALMIASGRGFLSQVEQLISMGASIHCKSSNGWMALDWAKRFGQTEVVDLL
ESYSASVEFGNLDESSLVQTSGSDLSAEDRELLNAYHHSFDDEKVDLDLIMHLLYSICHS
CDGGAILVFLPGYDEIVSLRDRILFDDKRFADNAHRYQVFMLHSNMQTLDQKKVLKSPPS
GVRKIILSTNVAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKMVWISKASAIQRKGR
AGRCQPGVCFHLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPINCPIVDFLMKAPD
PPPALIVRNAVQMLKTIDAMDPWEDLTELGYHLTELPVEPHLGKMVLCAVVLKCLDPILT
IACTLAYRDPFVLPTLASQKRAAMLCRKRFTAGTFSDHMVLLRAFQAWQKARSDGWERAF
CEKNFLSQARMEIIIGMRTQLLGQLRASGFVRSRGGVDIRDVNTNSENWAVVKAALVAGM
YPNLVHVDRESLVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDE
MTRAHRIANIRCCSVVTPVTVSLFCGPARLPSNALQEPSSFRGDGVSNDNSDSEMEDKTM
ANLALLKLDEWLHLKLDPEAAGLLLQLRQKWHSLFLRRMRAPSKPWSQVDEITVRAIVTV
LSTEEQSAGLQQPSGIGQRPRPMTCGELPFASTWKSPNSRKSSAETEFSDDSSNAEKVLM
KSTPPTLHQPKKYKEKNTVHSKRTSDDRSDQSSVKSTDSSSYPSPCASPSPISGKGSKSP
SPRPNMPFRYFIMKSSNVQNIDISQQKGIWSTTPSNERKLNRAFCESSTVYLIFSVQGSG
HFQGFARMASEIGCEKSQDWGSSGFGGVFKVEWIQKESIPFHFAHHLLNPWNDNKKVQIS
RDGQELEPQVGEQLLQLWDCIPLAAKNSTD
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcccagtagcgtctcgtcgcggcccagtagcgtctcgtcgcggcccagtagc
gtctcgtcgcggcagcctggcgggggcttggcctcggcctcctccgcggccgcggcctcg
gcctcctccgccgcggcctcctcctccgcggccgcggcctcggcctcctccgccgccgcc
gcggcctccgccgcctccgccggccccgcggcgggccgcggcaagaggctgaaggatatc
cgcgtcgacgaggaggtggagatcgcggtgaacctcgccctggagcggttccggtacgga
gaggagaaagaaatggagtttccttcctccttcactagcaccgaaagagcattcgttcac
cggctgtgtcagtctctcggactggtatccaaaagcaaagggaaaggagcaaatcgatac
ctgactgtaaggaagaaggatgtatcagaaccaacacatgcagtaatgacttgcagcttg
gctcccagtacgaaacataccattcggagtttaattcagagatttcctgtcacaaataaa
gaacgaacagaacttctgccaaagacggagcgaggaaatgcatgtgctgttgaatctgaa
aacagagatgtgaacaaggcaagtggacggcttaacaatggtatcccccaggttccagtg
aaaagaggggaatcggagtttgattccttcaggcaatccctaccagtttttgagaaacag
gaagaaattatcaaaataataaaggacaataaagttgttttggttgtaggagagactgga
tcaggaaaaactactcaaatccctcagttccttcttgacgaatgttacaaaaacagaact
ccgtgtcgtatattttgcactcagccaagacgtttggcagctgttggtgtggctgaaaga
gtggcagcagaaagaagagaaaaggttggccagacagttggttaccagatccgattagaa
agcagggtttctccaaagacactgctaacgttttgcactaatggcatactgcttcgcacg
ctaatggtaggagacagcgctctatcaactgtgacacatattattgtggatgaagtacat
gagagggataggttcagtgacttcttgttaataaaactcagagatgtgttgcgaaaacag
actaatctaaaactaattatttctagtgctgccctagatgcaaatctctttattaggtat
tttggaagttgcccagtaatacacatacaaggaagacctttcgaagttaaagagatgttt
ttggaggacattttacgaagcactgggtatacaaacaaagagatgataaagtacaaaaaa
gagaagcagcgagaagaaaaacagcaaagcactcttactgagtggtgttctgctcaagaa
aataatagcaaagtggaatctcggagacaaagatctgtcccaagtgcaactgaagagtat
aatctgttggatgatagtggtgatgcagtatttaatcaactgactgaaaaagatgcgaat
tgccttgaaccatggctaataaaagagatggattcttgtctttctgacatctggttgcat
aaagatattgatgcctttgctcaagtgttccatctcattttaaccgaaaatgtcagcgtt
gattacaggcacagtgaaaccagtgcaactgcactaatgattgcttcagggagaggattt
ctgagtcaagtagaacaactgatcagtatgggagcaagtatccactgcaaatcatccaat
ggctggatggctttggactgggctaagcgctttggacagacagaggttgttgacctgttg
gagtcctacagcgcttcagtggaatttggaaatctggatgaaagttccctcgtccaaaca
agtggtagtgacctcagtgcagaagacagagaactgttgaatgcttatcatcacagtttt
gatgatgaaaaagtagatctggacctgattatgcacttactttatagcatctgtcatagt
tgtgatggtggagcgattttagtatttcttcctggatatgatgagatagttagcctgagg
gaccgtattctttttgatgacaagagatttgctgataatgctcacagataccaagttttc
atgcttcattcaaatatgcagactttggatcagaagaaggtgcttaaaagtccaccttct
ggcgtccgcaaaataattctttctactaatgttgcagaaaccagcataacagtcaatgat
gttgtatttgttattgactcaggcaagatgaaagagaagtcttttgatgcactgagttgt
gttacaatgctaaaaatggtgtggatttcaaaagccagtgctatccagagaaaaggcagg
gctgggcgctgtcagccgggagtctgttttcatctcttcagcaggctccgatttcagaat
atgttggaatttcagactccagaacttctgagaatgccacttcaggagctttgtttacac
acaaaacttctggctccgattaactgtccaattgttgactttcttatgaaagctcctgat
cctccaccagctttaattgtgagaaatgctgtgcaaatgctgaagacaatagatgcgatg
gacccttgggaagatctcactgaacttggttatcatctcactgaattaccagtagagcca
caccttggtaaaatggtgttgtgtgctgttgttttgaagtgcctggatcctattcttact
attgcttgcactcttgcatatcgagacccttttgtcctacctacactggcctctcaaaag
cgtgcagccatgctgtgtagaaaacgttttactgcaggaacatttagtgaccatatggtg
cttctcagggctttccaggcatggcagaaggcgcgcagtgatggctgggagagagcgttc
tgtgaaaagaacttcctgtctcaagcaaggatggagatcattataggaatgagaacacag
ttgcttggccagcttagggcctcaggttttgttagaagcagaggaggagtcgatattaga
gatgttaatactaattctgaaaactgggctgtagttaaagctgccttagtggctgggatg
tatcccaatctagtgcatgtagacagagaaagcctggttttgactggaccaaaggagaag
aaagtgcgatttcatcctacctctgttcttagtcaacctcagtataaaaagattccccca
gcaaatgggcaagctgcagccattcaggcactccctacagactggcttatatatgatgaa
atgacgagagctcacaggatagcaaatatcagatgctgttctgttgtaacacctgtcact
gtgtcactcttctgtggaccagctagattaccaagtaatgctttgcaggagccttcatcc
tttcgaggggatggggtatctaatgataacagtgatagtgagatggaggacaaaacaatg
gctaatctggcactactgaagttagatgaatggctccatctcaaactggaccctgaagct
gctggtttgttgttgcaactcagacagaagtggcacagcttatttctgcgtcgtatgcga
gctccttctaaaccgtggtctcaagttgatgaaataactgtaagagcaattgtaactgtt
ttaagtactgaagaacagtctgcaggtttgcagcagccttcaggaattggtcagagacca
agacctatgacttgtggagaacttccttttgcgtctacatggaagtcacccaacagtaga
aaaagctcagcagaaactgaattctctgatgactcctctaatgctgaaaaagtcctaatg
aaatctacacctcccacacttcaccagccaaagaagtacaaagaaaagaacactgtgcac
tccaaacgaacttcggacgacaggtcagatcaatcatcagtgaagtctacagacagcagt
agctatcctagcccctgtgctagtccttctccaatatctggaaagggttccaaatctcct
tcaccaagaccaaatatgccgtttcggtactttataatgaaaagtagcaatgtgcaaaac
attgatatttctcagcagaagggtatatggtctactacgccaagtaatgaacgaaaacta
aatagagccttttgtgagagcagcactgtttacttaatattttctgttcaagggtctgga
cactttcagggttttgctagaatggcttcagagatagggtgcgagaaaagtcaagactgg
ggatcttctggctttggaggtgtatttaaggtggagtggatccaaaaagaaagcattcct
tttcattttgcacaccatttgctcaacccttggaatgacaataagaaagtacaaataagc
agagatggccaggagctggaaccacaagttggagagcagttgctacagctttgggactgt
attcctttggcagcaaaaaactcaactgattga
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integrated database retrieval system
