Accipiter gentilis (Northern goshawk): 126036030
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Entry
126036030 CDS
T08649
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
agen
Accipiter gentilis (Northern goshawk)
Pathway
agen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126036030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agen03041
]
126036030
03009 Ribosome biogenesis [BR:
agen03009
]
126036030
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126036030
Spliceosome [BR:
agen03041
]
Complex A
U2 snRNP components
U2 related factors
126036030
Complex B
126036030
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126036030
Ribosome biogenesis [BR:
agen03009
]
Eukaryotic type
90S particles
Helicases
126036030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
126036030
NCBI-ProteinID:
XP_049651244
LinkDB
All DBs
Position
3:28766892..28814542
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AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PTSNSTYYAAAGLPTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctagatctgggggacgattacagctccagcaagaaacgcacc
accgacgggaaagatcgtgaccgggacagggaccgtgatgaccgttctaaagatcgtgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcga
cctacatctaactctacgtattatgcggctgctgggttaccaactataaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacatacaccacggtattatgacatc
ctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacggatattttg
ataaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcagtggtgtgttgactacatgcgctcgttacctggaccaaagaggggagtagcatgt
acccagcctaggagagtagctgcaatgagtgtggcacagcgggttgctgatgagatggat
gtcatgctgggccaggaggttggttactctatacgatttgaagactgcagtagtgcaaaa
accattttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccatgaaagaacactggctactgat
attttgatgggagttttgaaggaagttgtaagacaaagatctgatttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatttattttgataactgtcctcttcta
actatcccgggtcgcacccatcctgtggagatattctatactccagaaccagaaagggat
taccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaagga
gatcttttactctttcttactggacaggaggagattgatgaggcttgcaagaggataaaa
cgtgaaattgatgatttaggccctgaagttggtgacatcaaaatcattccattgtattcc
acccttcctccacagcaacagcaaaggatttttgaacctcccccaccaaaaaaacaaaac
ggagcaataggaagaaaggtggtcgtgtccactaatattgctgagacatcattaacaata
gatggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtatacaatcctcgc
atcagagtggagtctctcttggtgactgcaattagtaaagcttctgctcagcagcgagct
ggccgtgctggtcgtactagaccaggcaaatgcttcaggctttatacagagaaggcttac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtgttgcagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccattggacccacaa
ctggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagactttaccagccgagactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggaacgaacagggcattac
ctaacagtaaaagataaccaggtggtgcagttgcatccctccactgttcttgatcataaa
ccagaatgggtgctctataatgagtttgtccttacaacaaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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