Astur gentilis (Northern goshawk): 126036064
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Entry
126036064 CDS
T08649
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03420
Nucleotide excision repair
agen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126036064
09124 Replication and repair
03420 Nucleotide excision repair
126036064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agen04121
]
126036064
03400 DNA repair and recombination proteins [BR:
agen03400
]
126036064
Ubiquitin system [BR:
agen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126036064
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
126036064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
126036064
NCBI-ProteinID:
XP_049651333
LinkDB
All DBs
Position
Z:66556818..66587748
Genome browser
AA seq
410 aa
AA seq
DB search
MVWAVQSYLVTFYDSAVLVVHVSLFVAFFSLVILRVLSLELNKDRDVERIHRSGVNTLDI
EPVEGRYMLSGGSDGVIVLYDLENLSRKPSYTCKALCSVGRSHPDVHRFSVETVQWYPHD
TGMFTSSSFDKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLC
DLKSGSCSHILQGHRQEVLAVSWSPRHEYVLATASADNRVKLWDVRRASGCLRTLDQHNE
EKSKASSEAAGTAHNGRVNGLCYTNDGLHLLTIGTDDRMRLWNSSTGENTLVNYGKVCNE
SRKGLKFTVSCGCSPEFAFVPYGSTIAVYTVFTGELITMLRGHYSTVDCCVFQPNFQKKK
CSKAPCTNNMSQNTRNFIVVAKIAISLLGYQLFESQFLMTFLKSLCLNNI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggctgttcagagctacttagtaacattctacgattctgctgttcttgttgtt
catgtatctttgtttgttgcttttttttcccttgttattttaagggttctaagtttggaa
ttaaataaagatagagatgtggaaagaatacacaggagtggtgtcaacacccttgatatt
gaacctgttgagggaagatacatgttatctggtggatcagatggtgttattgtgctttat
gaccttgaaaacttgagcagaaaaccaagttacacatgtaaagcactttgttctgtggga
aggagccatcctgatgtacatagattcagtgtggagacagtccagtggtaccctcatgac
actggcatgttcacatccagctcatttgacaaaaccttgaaaatatgggatacaaatact
ttacaacctgcagatgtatttcactttgaaggaacagtttatagccatcacatgtctcca
gttgctacaaagcattgtttaatagcagttggtaccaaaagccccaaagtacagctctgt
gacttgaagtctggatcctgttctcacattctgcagggtcacaggcaagaagtattggcc
gtgtcttggtccccacgtcatgagtacgttttggcaacagcaagtgctgacaatagagta
aaattatgggatgtgaggagagcatctggatgtctgcgtacgcttgatcagcacaatgaa
gaaaagtccaaagcatcttccgaggcagcaggcactgctcacaatgggagagttaatggt
ttatgctatacgaatgatggacttcatctcttaaccattggtacagatgatcgcatgcga
ctctggaacagctccactggagaaaacacgttagtgaattatgggaaagtctgtaatgaa
agtagaaaaggactcaaattcaccgtctcctgtggctgtagtccagagtttgcctttgtt
ccgtatggtagtaccattgctgtttatacagttttcacaggagaactgataacgatgctt
agagggcattacagtactgtcgactgctgtgtatttcaacctaattttcagaaaaagaaa
tgcagtaaagcaccatgcacaaataacatgtcacaaaatactaggaactttatagtggta
gcaaagattgcaatatccttgcttggataccagctcttcgagagccagttcctgatgacg
tttctgaaaagtctctgcctcaacaacatttaa
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