Astur gentilis (Northern goshawk): 126036083
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Entry
126036083 CDS
T08649
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03015
mRNA surveillance pathway
agen04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126036083
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
126036083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126036083
03019 Messenger RNA biogenesis [BR:
agen03019
]
126036083
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126036083
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126036083
U7-dependent histone pre-mRNA processing factors
126036083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
INTS7_N
Motif
Other DBs
NCBI-GeneID:
126036083
NCBI-ProteinID:
XP_049651381
LinkDB
All DBs
Position
Z:complement(291941..303338)
Genome browser
AA seq
1248 aa
AA seq
DB search
MAGPAEGPSPRMSVASQFFSEEECGSDGMSTSERVVDLLNQAALITNDSKINILKQVQEL
IINKDPTLLDNFLDEIIAFQADKSIEVRKFVVGFIEEACKRDIELLLKLIANLNMLLKDE
NVNVVKKAILTMTQLYKVALQWMVKSKVISELQEACWEMMAAMASDIILLLDSDNDGIRT
HAIKFVEGLIITLSPRMADSDVPKRHENDISLERIPKDHPYIKYNVLWEEGKAALEQLLK
FMVHPAISSINLTAALGSLATIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNL
KLHLLSVLRHPSSGDFQPQITTLLVDLGTQQAEIARSMPSPRDSRKRTRDEPDTTLKKMK
IEPPLGEDDEDKDLEPTTVTAPKATGQTNVPSDTDITAEFLQPLLTPENVANLVLISMVY
LPEAMPASFQATYTPVESAGTEAQIKHLSRLMATQMTAAGLGPGVEQTKHLKEEPKEEKA
AKPESVVIKRRLSALAQGQAISVLGAQGSAANLLEEEAPQTKRRPEPIIPATQPRLAGAG
GRKKVFRLADVLKPLSDAQMEKLKLSAVKRILRAERAVACSGAAQARVKILASLVTQFEV
PLKSEVLAFVLDDIRGRLDLAFAWLFQEYNAYLSRYPAGSLERYDECLIGLLAGLQEKPD
QKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLL
DLSSHEKDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEV
AAPWTEETIKQCLYLYLALLPHNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGMGMNS
PELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGL
EKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGDGASAVSPLNPGELLIALHNIDSSKCD
MKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQALTMYPRLGGFVMN
ILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVVLQLPPPQLAAIFDKCPELREPLLSH
VRALTPHQQAHIPLSTMAILEASTRHEPDAREGPPGEEKPLKRPSEEEAKGKALPSATGG
GPTVGAPPSEAPSDLGGADLEPPSIFISVTEDEESSREAASPPDATLDTPTAPPKDPPTS
TDPPQAVPPPVEAAPSSPPSSEPPPPGTQSPEVPPGGAPDPPPGPTEG
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccggctgaaggccccagcccccgcatgagcgtggcctcccagttcttcagc
gaggaagagtgcggtagcgatggcatgagcacttccgagcgggtggtggatctcctcaat
caggcggctttgatcaccaacgattccaagatcaacatcctcaagcaggtgcaggagctg
atcatcaacaaggacccaacgctgctggacaacttcttggatgagatcatcgccttccag
gctgacaagtccattgaggtgcggaagttcgtggtgggtttcatcgaggaggcctgcaaa
cgggacattgagctgctgctgaagctcatcgccaacctcaacatgctgctcaaggatgag
aacgtcaacgtggtgaagaaggccatcctcaccatgacccaactctacaaggtggctttg
cagtggatggtgaaatcgaaggtgatcagcgagttacaggaagcttgctgggagatgatg
gcggccatggccagcgacatcatcctcctcctcgactcagataatgacggcatccgcacc
cacgccatcaagtttgtggagggactcatcatcaccctgtcaccccgcatggccgactct
gatgtccccaaacgtcacgagaacgacatcagcctcgagcgcatccccaaagaccaccct
tatatcaaatacaacgtgctgtgggaggaaggcaaagctgccctggagcagctcctcaag
ttcatggtgcacccagcaatctccagcatcaacctgacagctgcactgggttccctggcc
accatcgcccgccagcgccccatgttcatggctgaggtcatccaagcctacgagaccctt
cacgccaacctgccccccaccctggccaagtcacaggtgagcagcgtccgtaagaacctg
aagctgcacctactcagcgtcctgcggcacccgtcctcgggggacttccagccccagatc
accaccctcctcgtcgacctgggcacccaacaggctgagatcgcccgcagcatgcccagc
ccccgcgactcccgcaaacgaacccgcgatgagcccgacaccaccctcaagaagatgaag
atcgaaccccccctgggtgaggatgatgaggacaaagacctggagccgacgacggtgact
gcacccaaagcgactggccagaccaacgtcccctcggacacagacatcaccgccgagttc
ttgcagccactcctcaccccggaaaacgtcgccaacctggtgctgatcagcatggtgtac
ctccctgaggccatgcccgcgtccttccaggccacctacacccctgtggagtcagccggc
actgaggcgcagatcaaacacctctcccggctcatggccacccagatgacagcagcagga
cttggccccggtgtggagcagacaaaacacctgaaggaggaaccaaaagaggagaaggcg
gccaagccggagagcgtggtgatcaagcggcggctgtcggcactggcccagggccaggcc
atctccgtgttgggtgcccaaggttcggccgccaatctgctagaggaggaagccccccaa
accaaacgtcgccctgagcccatcatcccagccacacagccccggctggcaggcgctggt
ggccgtaagaaggttttccgtctggctgacgtcctcaagccgctgagcgacgcgcagatg
gagaagctgaagctgagcgctgtcaaacgcatcctgcgcgccgagcgtgccgtcgcctgc
agtggggccgcccaggctcgcgtgaagatcttggcctcgctggtgacgcagttcgaggtg
ccactgaagagcgaggtgctggccttcgtccttgatgacatccgcggacgcttggacctg
gcttttgcctggctgttccaggagtacaacgcgtacctgagccgataccctgccggcagc
ctggagcgctatgatgagtgtctcattgggctcctcgccggtctccaggagaagcctgac
caaaaggacgggattttcaccaaagtggtgctggaggcgccgctgatcaccgagagtgcg
ctggaagtcatccgcaagtactgcgaggacgagagccggacctacctaggcatgtccacg
ctgcgtgaccttatcttcaagcggccatcacggcaattccagtacctccacgtcctgctg
gacctcagctcccatgagaaggacaaggtacgccagcaggccctcctcttcatcaagcgc
atgtacgagaaggaccagttgcgggagtacgtggagaagtttgccctcaactacctgcag
cttttggtgcaccccaacccaccctcggtcctcttcggggctgacaaagacacagaggtg
gcggcaccatggacggaggagaccatcaagcaatgcctctacctctacctggcattgctg
ccccacaaccacaagctcatccatgagttggcttccgtctacactgaggccattgctgac
atcaagcgcaccgtcctgcgggtcatcgagcagccgatccgtgggatggggatgaattca
cctgagctactgctgctggtggagaattgtcccaagggagctgagacgctggtgacgcgc
tgcctgcacagcttgacggacaaagtgcctccctcgcccgagctggtgaagagggtccgc
gacctctatcacaagcggctgccggatgtgaggttcctcatccccgtcctcaacgggctg
gagaagaaagaggtgatccaggcgctgcccaaactcatcaagctcaaccccatcgtggtc
aaggaggtcttcaaccgtctgctggggacacagcacggtgatggtgcctcagctgtgtcc
ccactgaacccgggagagctgctcatcgctctgcacaacatcgactcttccaagtgcgac
atgaagtccatcatcaaggccaccaacctgtgcttcgccgagcgaaacgtgtacacctca
gaggtgctggcagtggtgatgcagcagctgatggagcagaacccattgcccatgttgttg
atgcgaaccgtcatccaggccctcaccatgtacccccgcctgggtggcttcgtcatgaac
atcctctcccggctcatcatgaagcaggtgtggaagtaccccaaagtctgggaaggtttc
atcaagtgctgccagcgcacgaagccccagtctttccaggtggtgctccagctgcccccc
ccacagttggccgccatcttcgacaagtgccccgaactgcgcgagcccctcctcagccac
gtccgggccctcacaccccaccagcaagcccacatcccgctctccaccatggccatcctg
gaggcctccacccgccatgagcccgacgcccgggaggggccgcctggagaggagaagccc
ctgaagcggccaagcgaggaagaggcgaagggaaaggccctgccctcagccacggggggg
ggtcccaccgtgggggcacccccatctgaggcaccctctgacctggggggggcagacctc
gagcccccctccatcttcatcagcgttactgaggatgaggagagctcgagggaggctgca
tctccccctgatgccacccttgataccccgacagccccccccaaggacccacccaccagc
acggaccccccccaagcagtgccacccccagtcgaggcagcccccagcagccccccctcc
tcggaaccaccaccccccggcacccagagccctgaggtgccccctgggggggccccggat
cctccccctggcccgacagagggctga
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