Astur gentilis (Northern goshawk): 126036605
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Entry
126036605 CDS
T08649
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126036605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126036605
03019 Messenger RNA biogenesis [BR:
agen03019
]
126036605
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126036605
RNA polymerase I system
126036605
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
126036605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
126036605
NCBI-ProteinID:
XP_049652532
LinkDB
All DBs
Position
Z:760958..769558
Genome browser
AA seq
1082 aa
AA seq
DB search
MSDSDDSNFSEDESERSSEAEEVEENEAEEERASVAGSEKEEAEEEEEEEEEEYDEEEEE
EDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVK
DATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTP
MYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPT
PSPQGYGGTPNPQTPGYPDPSSPQVNQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPS
PSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNP
HTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSI
SSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLEEQLKILNLRFLGKLL
EA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcgacgacagcaacttctcggaggacgagagcgagcgcagcagcgaggcc
gaggaggtggaggagaacgaggctgaggaggagcgcgccagcgtggccggcagtgagaag
gaggaggctgaggaggaggaggaggaagaggaggaggagtacgacgaggaggaagaggaa
gaagatgacgaccggccggctaaaaagccacgccatggcggcttcatcttggatgaggcc
gacgtggatgacgagtacgaggatgaggaccagtgggaggacggggccgaggacatcctg
gagaaagaagagatcgaagcttccaacattgataacgtggtgctggatgaggatcgctct
ggcgctcggcggctgcagaacctctggagggatcagcgtgaggaggagctgggcgagtat
tacatgaagaaatatgccaagtcctcagtgggagagaccgtttacggtggttctgatgag
ctctcggatgacatcacgcagcaacagctcctgccaggagtcaaggaccccaatctctgg
accgtcaaatgcaagattggtgaggaacgcgccacggccatcgctctcatgcggaaattc
atcgcttaccagttcaccgacacgcccctgcagatcaagtcagtggtggcccccgagcac
gtcaagggttacatctacgtggaggcctacaagcagacgcatgtcaagcaggcgatcgag
ggtgtgggcaacctgcgcatgggctactggaaccagcagatggtccccatcaaggagatg
acagatgtcctcaaagtggtgaaggaggtcaccaacctcaagcccaaatcttgggtgcgc
ctcaaaagagggatctacaaggatgacatcgcccaggtggattacgtggagcccagccag
aaccagatttccctcaagatgatccctcgcatcgacttcgaccggatcaaagcccgcatg
agcctgaaagactggttcgccaagaggaaaaagttcaagcgacccccgcagcggctcttt
gatgccgagaagattcggtccctaggaggtgatgtggcatctgatggtgactttctcatc
ttcgaaggcaatcgctacagccgcaagggattcctcttcaaaagctttgccatgtcagct
gtgataacggagggggtgaagcccaccctgtcggagctggagaagtttgaggaccagccc
gaaggcattgacctggaggtggtgacagagagcacagggaaggaacgagagcacaacttc
cagcccggcgacaacgtggaggtgtgcgagggtgagctgatcaacctgcaaggcaaaatc
ctcagcgtcgacggcaacaagatcaccatcatgccgaaacatgaggacttgaaggacatg
ctagagttcccagctcaggagctgcggaagtatttcaagatgggtgaccacgtcaaggtg
atcgcggggcgttttgagggcgacacagggctgatcgtgagggtggaggaaaactttgtc
atcctcttctctgacctcaccatgcacgagctcaaggttctgccacgggacctgcagctc
tgctcagagacggcgtctggcgtggatgtagggggtcagcacgagtggggtgagctggtg
cagctggacccccaaacagtgggtgtcattgtccgcctggagcgggagacattccaggta
ctgaacatgtacgggaaggtggtgacagtgcggcaccaggctgtcaccaggaagaaggac
aaccgcttcgccgtcgccctcgactcggagcagaacaacatccacgtcaaggacattgtc
aaagtcatagacgggcctcactcgggccgtgagggggagatccggcacctcttccggggc
ttcgccttcctgcactgcaaaaagctggtggaaaatggcggcatgttcgtctgcaagacc
cggcacctcgtcctggcggggggctccaagccgcgggatgtcacgaactttaccgtgggt
ggttttgctcccatgagcccccgtatcagcagcccgatgcaccccagcggggctggccaa
cgcggtggttttggtggcggtggcatgagccgtggccgcgggcggcgggataatgacctc
attgggcagacggtgcgcatctcccaaggaccctacaaaggctacatcggggtagtgaag
gacgcgacggagtcgacagcccgcgtggagctacactccacctgccagaccatctcggtg
gaccgccagcgcctgaccactgtgggttcacggcgcccaggtgggatgacgtcagcctac
gggcgcacccccatgtacggctcccagacccccatgtatggctctggctcccgcaccccc
atgtatggctcgcagacccccctgcatgacggcagccgcacgccacactatggctcgcag
acgccgctgcatgatggcagccgcacgcccgcccaaagcggcgcctgggaccccaacaac
cccaacacaccctccagggccgacgaggacttcgagtacggcttcgatgacgagcccaca
ccctcaccacagggctatgggggcacccccaacccccagacccctggctaccccgacccc
tcgtctccccaggtcaaccagccctacaacccccagacccccggaacaccagccatgtac
aacacggaccagttctcgccgtacgccgtcccatcgccgcagggctcctaccagcccagc
cccagcccccagagctaccaccaagtggcccccagccccgtgggctatcagaacacccac
tcgccggccagctaccaccccacgccgtcacccatggcctaccaggcaagccccagcccc
agcccagtgggctacagccccatgacccccggggccccctctccgggggggtacaaccca
cacacccctggatcggggatcgagcagagctccagcgactgggtgaccaccgacatccag
gtgaaggtccgtgacacctacttggacagtcaggccgtgggacagaccggtgtaatccgc
agcgtcacgggcgggatgtgctccgtctacctgaaggacagcgagaaggtggtgagcatc
tccagcgagcacctggagcccgtcacccccaccaagagcaacaaggtaaaggtgatcctg
ggggaggaccgtgaagccaccgggatcctgctcagcatcgacggggaggacgggatcgtc
cgcatggacttggaggagcagctcaagatcctcaacctccgcttcctcggcaagctgctg
gaggcctga
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integrated database retrieval system
