Astur gentilis (Northern goshawk): 126037508
Help
Entry
126037508 CDS
T08649
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126037508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126037508
03041 Spliceosome [BR:
agen03041
]
126037508
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126037508
Spliceosome [BR:
agen03041
]
Complex B
Other components
Prp19-related factors
126037508
Complex C
126037508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_12
TPR_2
TPR_19
TPR_8
Suf
TPR_15
TPR_7
ARM_TT21_C
TPR_16
PPR
ARM_TT21
TPR_1
Motif
Other DBs
NCBI-GeneID:
126037508
NCBI-ProteinID:
XP_049653800
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MAEREKMADAVEMPEREELRFEEEDVQHEEEILRNPFSVRCWLRYAQARQKGPRHRLNLL
FERALRELPGSYKLWYQYLRQRRQQVKGRCPTDPAYEEANGCHERALVFMHKMPRIWLDY
CQFLVDQGRITRTRRTFDRALRALPITQHHRIWPLYLQFVRRYPLPETAVRVYRRYLKLS
PESAEEYVEYLRSVGRLDEAAVRLARLVNDERFVSKEGKSNYQLWQELCELLSQHPERVR
SLDAGAIIRGGLTRFTDQLGRLWGALADCYIRSGHFEKARDVYEEAVQTVMTVRDFTQVF
DSYAQFEESVIAAKMETVAELGKEEDEEVELELRLARFEQLMARRPLLLNSVLLRQNPHN
VHEWHKRVQLYQGRPEQIINTYTEAVRTVDPFKATGRPHGLWVAFARFYEDNGQLDDART
ILTKATRVRFRQVEDLAAVWCEFGEMELRHENYDEALRILRKATALPAKRAEYFDSTEPV
QNRLYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYGLFLEEHGYFEE
SFKAYERGIALFRWPNVADIWHTYLSKFVARYGGRKLERARDLFEQALDGCPPKYAKTIY
LLYAKLEEEFGLARHAMGVYERATRAVLPAQQHDMFNIYIKRAAELYGVTHTRPIYQKAI
EVLGDDAARELCLRFADMECKLGEVDRARAIYTYCSQICDPRITGTFWQTWKDFEIRHGN
EDTIREMLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGLDDMKLLEQRA
EQLAAEARRDTPRPPEKVLFVRAEGPREALAALSQQGNPDEIDLGDEDEPEPDEVQLEQK
RVPSSVFGGLKDD
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgggagaagatggcggacgcggtggagatgccggagcgggaggagctgcgc
ttcgaggaggaggacgtgcagcacgaggaggagatcctgcgcaatcccttctcggtgcgg
tgctggctgcgctacgcccaggcccggcagaaggggccacgccaccgcctcaacctcctc
tttgagcgcgccctcagggagctgcccggcagctacaagctgtggtaccagtacctgcga
cagcggcggcagcaggtgaagggacgctgccccaccgaccctgcctacgaggaggccaac
ggctgccacgagcgcgccctcgtcttcatgcacaagatgccccgcatctggctggattac
tgccagttcctggtggatcagggccggatcacgcggacgcgccgtaccttcgaccgggcc
ttgcgggcgctgcccatcactcagcaccaccgcatctggcccctctatctccagttcgtc
cggcgctaccccctgcccgagaccgccgtccgcgtctaccgccgttacctgaagctgagc
cccgagagcgcggaggagtacgtggagtacctgcgctccgtggggcgcctggacgaggcc
gccgtgcgcctggctcgcctcgttaacgacgagcgctttgtctccaaggagggcaagtct
aattaccagctgtggcaggagctgtgcgagctgctctcccagcacccagagcgggtgcgt
tctctggacgcgggtgccatcatccgggggggcctgacccgcttcaccgaccagctgggc
cggctctggggagccctggccgactgctacatccgcagcggccacttcgagaaggcccgg
gacgtctacgaggaggcagtgcagacagtgatgacggtgcgggacttcacccaggtcttc
gacagctacgcccagttcgaggagagcgtcattgctgccaagatggagacagtcgcggag
ctgggcaaggaggaggacgaggaggtggagctggaactgcggctggcccgcttcgagcag
ctgatggcccggcgcccgctgctgctcaacagcgtcctgctgcgccagaacccccacaac
gtccacgagtggcacaagcgggtgcagctctaccagggacgtcccgagcagatcatcaac
acctacacggaggctgtccgcaccgtggaccccttcaaggcgacggggcgcccgcacggg
ctgtgggtggccttcgcccgcttctacgaggacaacgggcagctggatgatgctcgtacc
atcctgaccaaggccacccgcgtccgcttccggcaggtggaggacctggccgccgtctgg
tgcgaattcggggagatggagctgcgccacgagaactacgacgaggccctacgtatcctg
aggaaagccacggcactgcctgccaagagggccgagtactttgactccacggagcccgtc
cagaaccgcctctacaagtccctcaaggtctggtccatgttggctgacctggaggagagc
ctgggcaccttccagtccaccaaggcagtgtacgaccgtatcctggacctgcgcatcgcc
accccccagattgtcatcaactacggcctcttcctggaggagcacggctacttcgaggag
agcttcaaggcctacgagcgaggcatcgcgctcttccgctggcccaacgtggcggacatc
tggcacacctacctcagcaagttcgtcgcccgttacggcgggcgcaagctggagcgagcg
cgggacctcttcgagcaggcgctggatgggtgcccccccaaatacgccaagaccatctac
ctgctgtacgccaaactggaggaggagttcgggctggcgcggcacgccatgggggtgtac
gagcgtgccacccgcgctgtcctgcccgcccagcagcacgacatgttcaacatctacatc
aaacgggcggccgagctctacggcgtcacccacacccgtcccatctaccaaaaagccatc
gaggtgctgggtgacgacgcagcgcgggagctctgcctgcgcttcgcagacatggagtgc
aagctgggggaggtggatcgggcccgcgccatctacacctactgctcccagatctgcgac
ccccgtatcacgggcaccttctggcagacctggaaggatttcgagatccgtcacggcaac
gaggacacgatccgggagatgctgcgcatcaagcgcagtgtccaggccacctacaacacc
caggtcaacttcatggcctcccagatgctcaaggtctacagcaatgccactggcaccgtg
tccgacctggccccaggacagagcggcctggatgacatgaagctgctggagcagcgagcg
gagcagctggcggccgaagcgcggcgggacaccccccgcccccccgagaaggtcctcttc
gtcagggccgagggcccgcgggaggctctggccgccctgtcccagcaggggaaccccgac
gagatcgacctgggggacgaggacgagcccgagcctgacgaggtgcagctggagcagaag
cgggtgccctcctccgtctttgggggcctgaaggacgactga
DBGET
integrated database retrieval system
