Astur gentilis (Northern goshawk): 126037548
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Entry
126037548 CDS
T08649
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126037548
04131 Membrane trafficking [BR:
agen04131
]
126037548
03029 Mitochondrial biogenesis [BR:
agen03029
]
126037548
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126037548
Membrane trafficking [BR:
agen04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126037548
Mitochondrial biogenesis [BR:
agen03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
126037548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
126037548
NCBI-ProteinID:
XP_049653864
LinkDB
All DBs
Position
3
Genome browser
AA seq
3095 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDESASR
NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDPETRSDVSTASFSASMKGEI
TSELASSSGVSTAGSGSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLTSTSAEGEED
DVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGAE
GQYSGMQIGQLQDEEDEAANIFQDDSSESFRNSSVALQQPHLLKTMSHSRQPSDSSVDRF
TSKEDAADPGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRDV
RVSVKALAVSCVGAAIALHPESFFSKLYKTPLEAMGEEYEEQYVSDVLNYIDHGDPQIRG
ATAILCGTIVNSILTKSRFDVEKWLINVRSSTGNLFSLVDCIPLLQKMLKDESSVTCKLA
CTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEGK
TESLHRGIHHYTGLLKLQERVLNNVVICLLGDEDPRVRHVAAASLVRLVPKLFYNCDQGQ
ADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRIYRGYNMLQSPTDVTMENNLSRVI
AAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSPSDEAQKGCTIGM
AGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSSEEDSNQGAAKLEEPW
PALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKASLPSLTNPPSLSPIRRKGK
EKESVEQASVPMSPKKGGEASPATRQTDTTGPVPTSKSSSVGSFYHLPSYLKLYDVLKAT
HANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREPT
MATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTHF
TQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSITSAAKHRADKNAIHSHIRLFE
PLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQ
FRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIHLCDGIMASGRKAVTHAIPALQPIV
HDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRL
SRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMASV
STVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAISRLRRGENNLSVPED
RTEVKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLIH
IFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVNY
TNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDKSDSESKRGMCNREIVRRGALILFCDY
VCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLA
APTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATLQ
NSMTQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDGE
DQPALENVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSLL
APCLSLGMNEISRDQKSSFFETARRVTLDHVSTTVQNLPAIHQILQPLLPAEPSAYWKKL
SDIFGDEMMYQSMMTLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFVVMSVEALSWHLM
HDQIPLSVDLQAALDCCCLTLQQPSLWNLLASAANVTHACSLINCIRFIIEAVAVEPGNQ
LLSPERKKTTSKGLSEVEVDSNTQKTKHITAACEMVAEMVECLQTVLALGHKRNSSIPAF
LTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTIFPEIPVEFLQEKEIFK
EFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAIT
SLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRDN
IATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGNN
ITPLREEEWGEDEEDENDVLAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPSN
PSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPATC
KAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPIIS
EYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGSD
ETTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCMY
TGKEKISPSRTTDANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDDF
FPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRT
PVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEEL
DRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC
NT seq
9288 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaggccttcgagtcgttgcgctccttccagcagcag
cagggtccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagtgaatcattgcctaacaatatgtgaaaacatagttgctcagtct
ttaagaaattctccagaatttcagaagctgctggggattgctatggaactctttctcctc
tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcctaggttacaattagaactgtataaagagatt
aaaaagaatggtgcttccagaagtctacgtgctgcactctggaggtttgctgaacttgcc
catcttgttcggcctcaaaagtgcaggccatacttagtgaaccttttgccctgtctaaca
cgaataagtaagagacccgaagaatcagtacaagagacgctagctgcagcaataccaaaa
attatggcagcgtttggcaattttgcaaacgacaatgagattaaggttttattgaaggct
ttcatagctaatcttaaatccagttctcctactatccgtcgaacggcagcaggatcagca
gtaagcatctgtcaacattcgcgaagaatgcagtatttttatgcctggttattgaatgta
cttttaggcttgttggttcctgtagaagatgatcatcctactcttttaattctgggtgtt
ttacttacactaaggtatctcatacctttattgcaacaacaagtaaaggataccagcctg
aaagggagttttggtgtaacaagaaaagaaacagagatttcaccttcaccagaacaactt
atacaggtttatgaattgactctgcattacacccagcatcaggaccataatgttgtgact
ggagctttagaattattacaacagctctttagaacgccaccacctgaacttctccatgct
ctgactgcttcaggtggcatcgcacaggtcagtgtatccaaagatgaatcagccagcagg
aaccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgcaagaaagcataaaggtaaaatacttcttggtgaagaagaaggtttggaggatgat
cctgaaacccgatcagatgtcagcaccgcatcattttcagcttccatgaagggtgagata
accagtgaactagcttcttcatcaggtgtatcaacagctgggtcagggagttcagctgct
gatcctactggacatgatatcattactgagcagccacgttctcaacatacgttgcagtca
gactctgtagacctgacaagctgtgatttgacaagtacatctgctgaaggggaagaagat
gatgtgcttagccgaagctccagccagatcagtgctgtccagtcagatcccactatggac
ttgaatgatggtacacaggcttcctcaccaattagtgatagctctcagactactacagaa
ggtccagactctgctgtaaccccttcggacagttctgaaattgttttggagggtgctgaa
ggacagtattctggaatgcaaattgggcagctgcaggatgaggaagatgaggctgcaaat
attttccaagatgattcatcagagtctttcagaaattcttctgttgctcttcagcagcct
cacctgttgaaaaccatgagccatagtaggcaaccttctgacagcagcgtagatagattt
acatcaaaagaagatgcagcagatcctggtgatcacgaaaataagccctccagggtaaag
ggagacataggtcactatactgatggaaattctgcacctttagtgcactgcgttagactt
ctgtcagcctcttttctacttactggggagaaaggtgctttagttcctgatagagatgtg
cgagtcagtgtaaaagccctggcagtaagttgtgttggagcagccatcgcacttcaccct
gagtctttcttcagcaaactgtataaaacaccccttgaagcaatgggagaagagtatgag
gagcagtatgtatcagatgttctgaactacattgaccatggagatccccagattagagga
gctactgccattctgtgtggaacaattgtcaactctattctaactaaatcccgctttgat
gtggaaaaatggctaataaatgtcagaagctcaacaggaaatctcttttccttggtagac
tgcatacctctgttacagaaaatgctgaaagatgagtcctctgttacatgtaaactggct
tgtacagctgtgaggcattgcatcatgagcttatgtagtagcagttatagtgaactaggt
ttacaactaattgttgacctccttacgctgaagaatagctcatattggctagtaagaacg
gaacttctggaaactcttgcagaggtagattttcggctagtcagcttcttggaaggaaaa
actgagagcttgcatagaggtattcatcattataccggtttactaaaacttcaggagaga
gtgcttaataatgttgtaatatgtttgcttggagatgaagatccaagagtgagacatgta
gctgcagcttcattagtgaggcttgttccaaagctattttataactgtgatcaaggacag
gctgatccagttgtggcagtagcaagagaccaaagcagtgtctacttgaaactactaatg
catgaaacacagcctccatctcactttgcggtgagcactatcaccagaatatatagaggt
tacaatatgctgcaaagtccaacagatgtcactatggaaaacaatctgtcaagggttatt
gcagcaatttcccatgcattgacaatatccactacaagagcacttacgtttggctgctgt
gaagctttgtgtcttctttccacaacatttccagtctgcacctggagtgtgggatggcac
tgtggtgtttcccagccaagtccttcagatgaagctcagaagggctgcaccattggaatg
gctggcatggtcctgtctctcctttcatcagcatggttcccgctggacctctctgcacat
caggatgctttgattttgactggaaacttgcttgcagcaagtgctcccaagtgcttaaag
aatccctggagttctgaggaagattcaaaccaaggcgctgcaaagctggaggaaccctgg
ccagctctggcagatagaactcttgttactttagtagaacagctcttctctcatctgctg
aaggtcattaatatttgtgcacatgtaatggatgatgttgctcctgggccagcagtaaag
gcatcattaccttctctcacaaacccaccttctcttagtccaattcggaggaaggggaaa
gagaaggaatctgtcgaacaggcatctgtgcccatgagccctaaaaagggtggtgaagca
agtccagctactaggcaaactgatactactgggcctgttccaacaagtaaatcgtcttca
gtaggaagcttttatcatcttccatcatatctgaagttatatgatgtcttgaaagcaacc
catgctaattacaaggttactttggatctccagaacagtaatgaaaagtttggatgtttc
ttacggtctgccttagatgttctgtctcaaatcttggaacttgctactcttcaagacatt
ggaaagtgtgtagaagaaattttgggatacctaaagtcatgtttcaacagagagccaaca
atggcaacagtttgtgtacagcagttattgaaaacattgtttgggacaaatctggcttct
cagtatgatggcttgtcttcaaaccccaacaaagctcaaggcaaagctcaacgcttaggt
tcttccaatttgagacctggtctctatcattattgcttcatggcaccatatacacatttt
acacaggcccttgctgatgctagtctaaggaacatggttcaggctgagcaggaacacgat
gcttcaggatggtttgatgtgttgcaaaaagtttctacacagctgaaaactagcattacc
agtgcagcaaaacatcgtgctgataagaatgctattcacagtcacattcgtttatttgaa
ccccttgtcataaaagcattgaaacaatatactacaacaacatcggtacagctgcagaga
caagttctagacttgcttgctcaactggttcagctacgagttaactactgtcttctggat
tcggatcaggtgtttattggatttgtgctaaagcagtttgaatacattgaagtaggacag
ttcagggagtctgaagcaattattcctaatatcttttttttcctggtgttgctgtcttat
gagcgatatcattccaaacagataattggaattcctaagatcattcatctgtgtgatggt
atcatggccagtgggaggaaagctgttacacatgcaataccagctctgcaacccatcgtt
catgatctgtttgtgttaagagggacaaataaagctgatgctggaaaagaattggaaaca
caaaaggaggtggtagtgtcaatgctgctgagacttattcaataccatcaggtgctagaa
atgttcatcttagtattgcaacagtgtcataaagaaaatgaagacaaatggaaaagattg
tctcggcaaatagctgacattattctcccaatgcttgcaaaacaacagatgcatatagac
tctcatgatgctttgggagtattgaacactttgtttgaaattttggctccttcatccctt
cgccctgtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatcagtg
agcacagtccagctatggatttctggaattttagctatccttagagttctgatttcacag
tcaacagaagacatcgttctatcccgtatacaagagctttctttctcaccatatttgatt
tcgtgtcaagcaattagcagactgagacgtggagaaaataacttatctgtaccagaggat
cgcactgaggttaaacaggctaaatatctgcctgaagagacattttctaggttcttacta
caactggttggcattctcctggaagatatcgttaccaaacaactgaaagtggacatgaat
gagcagcaacatactttctactgccaggagctgggcacgctgcttatgtgcttgatacat
attttcaaatcagggatgtttagaagaatcacagctgcagccaccagactttttacagga
gatggatctgatggtagtttctatacccttgaaagtttgagtgaccttgttcagtccatg
attcccacgcatccttcattagtacttctctggtgtcaaattctgcttcttgtcaattat
accaactacaactggtggtcagaagtgcatcaaaccccaaagagacatagtctttctact
actaaattgcttagccctcagatatctggagacagtgataaatcggattcagaatctaaa
cgtggcatgtgcaatcgagagatagtgagaagaggagcactcattcttttctgtgactac
gtttgtcaaaacctacatgattcagaacacttgacctggcttattgtgaatcatgttcaa
gacttgattaatctgtcccatgagcctccagtacaagactttattagtgctgttcacagg
aattcagcagccagtggtctctttatccaggccattcaatcgcgatgtgaaaatcttgca
gctcccacaactctgaagaagactttacagtgcttagagggaatacatctcagccagtct
ggggctgtcttaacattatatgttgataagcttctgtgtactccattccgtgtgcttgct
cgcatggttgacacactggcttgccgtcgggtagaaatgcttttggctgcaactttacag
aacagcatgactcagttaccagttgaagaactggatagaattcaggagtaccttcaaaac
agtggactagcaacaagacaccaaagactttactcgctcttggataggtttcgtcttatg
gtagcaccggacacaactagtccttcacctctggttacctcacacccactagacggagaa
gaccaaccagctttagagaatgtaattctagacaaagactggtatgtgtcactagtgagg
tcacagtgttgcatcaagtctgactcggcactgctagaaggcgcagagctggtaaatagg
attccccagcctgacctgaactccttcatgaccagcaaggaattcaacctaagcttgtta
gcaccttgtttaagccttggcatgaatgaaatatcaagagaccagaagagtagcttcttt
gaaacagctcgtagggtaactctggatcatgtgtctaccactgtacaaaaccttcctgcc
atccaccagattcttcaaccactgttgccagctgagccatcagcctactggaaaaaacta
agcgatatctttggagatgaaatgatgtatcagtctatgatgactctttgtcgtgccctg
gctcagtatttgttgttactctcaaaactaccagctggtctccgtgttccacctgacaaa
gaggatgatatcctgaaattcgtagttatgtcagtagaggcactatcatggcatttaatg
catgaccagattccattaagtgtagatcttcaagctgctctggattgttgctgtctgaca
ttacagcagcctagtctctggaatttgctggcttctgcagctaatgtgacacatgcttgc
tccttaattaattgcattagatttatcatagaagcagttgctgttgaacctggtaatcaa
cttcttagtcctgaaagaaagaagactacttcaaaaggcttgagtgaagttgaagttgat
tcaaacacacagaaaacaaaacacattactgcagcttgtgaaatggtagctgagatggtg
gaatgcttacagactgtcttggcactggggcacaaaagaaacagcagtatcccagcattt
cttactcctgtcctcaagaatatcatcatcagtttagcaaggctgcctctagtgaacagt
tacacaagagtacctcccttggtctggaaattgggctggtcgccaaagcctgcaggtgac
ttcggcacaatttttcctgaaatcccagtagaatttcttcaagaaaaagaaatctttaag
gagttcatctatcgcattaatacacttggatggatcagccgtactcagtttgaagagact
tgggctactttgcttggtgtgcttgtaactcagcctattgtaatggaccaggaggagaac
caacaagaagaagatacagagaggacacaaattaatgttcttgcagtacaagccataact
tccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcagttagctgtttg
gaacagcagccccgcaacaaagctttaaaagctctggacacgaggtttgggaggaagcta
agtgttatcaggggaattgttgaacaggaaatccaagcaatggtatctaagagagataat
attgctactcatcacttataccaagcttgggaccctgttccatcactttctcctgctact
acaggtgctcttatcagccatgaaaaactcttactgcagatcaatactgaacgagaaata
ggagatatggattataaactgggacaggtctctatacactccatatggttaggaaataat
atcactccattgagagaagaagagtggggtgaggatgaagaagatgagaacgacgtactt
gctccttcctcaccaccaacctctcctattaataccaggaagcaccgggctggtgtggat
atacattcttgttctcagttcttgcttgaactgtatagtcagtggatattgccatcaaac
cctagcaagagaacgccagtcattttgattagcgaagtggtgcgatcacttctggcagtg
tcagacttatttacagaaaggaatcagtttgagatgatgtatacaacgttgacagaattg
cgaaaggtgcatccttcagaagatgagatccttgtacagtatttgataccagccacttgt
aaagctgcagctgttctgggaatggataaagctgtggctgaaccagtaagtcgactgctg
gaatcaaccctaagaagcacccatatgccaagtcggattggagctttgcacggaattctt
tatatccttgagtgtgacttgcttgatgagacagcgaagcagctcattccaattatcagc
gagtatctgctttccaatttgagaggagtagcacattgtgtgaatattcataaccaacag
cacatcttagtaatgtgtgcagctgctttctatttgatcgagaattacccgcttgatgta
gggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagtgat
gaaacaacgccatccattatttatcattgtgtcctgagaggattagagcgactcctcctt
tcagagcaactttctaggctggatagtgaatcactagtgaaactgagtgttgacagagtg
aatgtgcagagcccccacagagcaatggcggcactcggattaatgctgacttgcatgtac
acaggaaaggaaaaaatcagccctagtcgtaccacagatgcaaatcctgctgctcctgac
agtgaatctgtgatcgtagcgatggaacgagtatcagtcctttttgataggatcaggaag
ggatttccttttgaagctagagtagtggctcggatcctcccacagttccttgatgacttt
ttcccaccacaagacgtaatgaataaagttattggagaatttttatccaatcaacaacct
tacccacaattcatggcaacagtagtttataaggttttccagacactacatagcactggg
cagtcctcaatggtccgtgactgggtgatgctctctctctctaatttcacacaaagaaca
cctgtggcaatggcaatgtggagtctttcctgtttttttgtcagtgcttccaccagtcaa
tggatttcagcaattcttccacatattatcagcagaatgggaaaatcggagcaagtggat
gttaacatcttctgtttggtggccatagacttctaccgacatcagatagatgaagaatta
gatcggagggcctttcagtcggtgttcgaggtggtagcatctccaggaaccccatatcat
cgcttactaacttgtctgcaaaatgtccacaaggtcacagcatgttga
DBGET
integrated database retrieval system