Astur gentilis (Northern goshawk): 126037646
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Entry
126037646 CDS
T08649
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126037646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126037646
03036 Chromosome and associated proteins [BR:
agen03036
]
126037646
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126037646
Chromosome and associated proteins [BR:
agen03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126037646
PBAF complex
126037646
GBAF(ncBAF) complex
126037646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
126037646
NCBI-ProteinID:
XP_049654103
LinkDB
All DBs
Position
4:complement(47047855..47138413)
Genome browser
AA seq
1135 aa
AA seq
DB search
MRGVRRVGGAGPRWRRSARVTMAAAVAAGGGTGPGAAAAAAGGAAAAAATAAVAVSGGPG
LAALSVARRKDGGPTGKFWESPETVSQLDSVRVWLGKHYKKYVQADAPTNKTLAGLVVQL
LQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSR
MDRNVEMFMNIEKTLVQNNCLSRPTIYLIPDIELKLANKLKDIVKRHQGAVTEEKSKATH
HVYPSPTSMDDDEWLRPVMKKDKQVLVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWK
VHAKWILDTDIFNEWMNEEDYEVDENRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRK
RKHSPSPPPTPVESRKKTGKKGQTALYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVL
PKNVNPKKDSENTPVKGGTVADLDEQDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQ
TNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLTGDVCAVMRVHAFLEQWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSG
LMPLHIRTPQVPAAQQMLSFPEKNKEKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTE
QETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQP
VPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAA
RASGKVDPTYGLESSCIAGTGPDEPEKIDGAEEEKMETETDGQQSEKVENKAESEIEEGD
KVQEGENERNPEKEQDSEVTADPKPEEKEAEENKENVDASKDKENEAGKKKVEHEISEGN
VATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREK
EALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQHSQNPQQPHQHSSGPGMNPLGAAA
HPGLLPHQQPPPYPMMHHQMPPPHPPQPGQMPGPGSMIPGQPMPGRMMPSVSANIHPAGG
GPPQPGMSPMSGNLIGPRVPLAAPNGMYPPPAQPPPPAEGVTPPPAGAPPASAAP
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgtgaggcgggtgggaggcgcagggccgcggtggcggcgctcggcgagggta
acaatggcagcggcggtggcggcgggcggcgggacgggacccggagccgcggcggcggcg
gcagggggggcggcggcggctgcggcgactgccgccgtggcggtaagcggtggtccaggg
ttagcggcgttgtcggtggctcgacggaaagacggcggcccgacggggaagttctgggag
agcccggagacggtgtcccagctcgactcggtccgcgtctggctggggaagcactacaag
aagtacgttcaagcagatgctcctaccaataaaacactggctgggctggtggtgcagctg
ctgcaattccaggaagatgcctttggaaaacatgtcaccaatcctgccttcacaaagctt
cctgcaaagtgcttcatggatttcaaagctggaggtacattatgtcacattcttggtgct
gcttacaaatataagaatgaacagggctggcggaggtttgacctgcagaatccatcccga
atggatcgaaatgtggagatgttcatgaacattgagaaaacactagtgcagaacaattgt
ctgagcagaccaaccatctacctcattccagatatagaactgaagttggctaataaattg
aaggatattgtcaaacgtcaccagggagcagtaactgaagagaaatcaaaggctacccac
catgtttatccaagtcctacctcaatggatgatgatgaatggctgagacctgtgatgaaa
aaagacaagcaggtgctggtacactggggcttttttccagacagctatgacacttgggtt
catgccaatgaaatagatgctgaaattgaggatcctccaattcctgaaaagccatggaag
gttcatgccaagtggattttggacacagatatattcaatgaatggatgaatgaagaagat
tatgaggtagatgagaacaggaaatcagtgagttttcgacagaggatctccatgaaaaat
gaagagcctgtacgtagtccagagaggagagacaggaaagcagcagcaagtacaaggaag
agaaagcattctccttctccaccccccactcctgtggagtcgagaaaaaagacagggaag
aaaggacaaacagccttatatgggaaaaggagagggcagaaagaagaagatgagcaagaa
gatcttacaaaggacatggaggatcccacaccagtacctaatatagaagaagtggtactt
cccaaaaatgtgaacccaaagaaagacagtgaaaacacgcctgtgaaaggaggaacagta
gcagaccttgatgaacaggatgaggagacagtggcaactggtggaaaggaagatgaagat
cctaacaaaggcgatcaaagtcggtcaattgatccaggtgaagataatgtcacagaacaa
accaaccacatcattattccaagctatgcatcttggtttgactacaactgtattcatgtg
attgaacgtcgtgctcttcctgaattcttcaatggaaaaaacaagtccaagactccagaa
atatacctggcttaccgcaacttcatgattgacacctatcgcttaaaccctcaagagtac
ttgaccagcactgcctgcagaaggaatctgactggagatgtgtgcgctgtcatgagagta
catgcttttctggagcagtggggtctgattaactaccaagtggatccagaaagccgtccc
atggcaatgggccctccccctactcctcacttcaatgtgctggctgatacaccctctgga
cttatgcctctccatatccgcactccacaggttccagctgctcagcagatgttgagtttt
cctgagaaaaacaaagagaaacctactgatctgcagaactttggacttcgcacagacatt
tactcaaaaaagactttagcaaagagtaaaggtgcaagtgctggaagagaatggacagaa
caagagacattgctgctattagaagctctggagatgtataaagatgactggaacaaagtc
tcagagcatgttgggagccgtacccaagatgaatgcattctccattttctgagacttcca
attgaagacccctatttggagaactctgatgcatctctgggcccgctggcttaccagccc
gtacctttcagccagtctggcaatccagtgatgagtaccgttgcttttctggcatcggtg
gtggatccccgggtggcatcagccgcagcaaaggctgcattagaggaattttctcgagtc
agagaggaggtaccactggagcttgttgaagctcatgtaaagaaagtacaggaagcagca
agagcctctgggaaggtggatccaacatacggactagagagcagctgcattgccggaaca
ggtccagatgagccagagaaaatcgatggagccgaagaagaaaagatggaaaccgagaca
gatgggcaacagtctgagaaggttgaaaacaaagcagagagtgaaattgaggaaggtgat
aaagtacaagaaggagaaaatgagagaaatccagaaaaagagcaagacagtgaagtgact
gcagaccccaagccagaagaaaaggaggcagaagagaacaaggagaacgttgatgcaagc
aaagacaaagaaaacgaggctgggaaaaagaaagtggaacatgaaatctcggaaggaaac
gtagctacagctgcagctgctgcccttgcctcagctgccaccaaagcaaagcacctagca
gcggtggaagaaagaaagatcaagtccctggtcgcccttttggtggagacacagatgaag
aagctggagataaaacttcgccattttgaggagttggaaaccattatggacagagagaaa
gaggcattagagcagcagagacaacagttgctgacggaacgccagaattttcacatggaa
cagctgaaatatgctgaattaagggctcgtcagcaaatggagcagcagcacagtcaaaac
ccacagcagcctcaccagcactccagtgggcctgggatgaacccccttggggcagcagca
catccaggcttactgcctcatcagcagcccccaccgtaccctatgatgcaccaccaaatg
ccaccacctcacccaccacagccaggtcagatgccggggccgggttcgatgatacctgga
cagcccatgccaggccggatgatgccaagcgtgtcagccaacatccatccagccggcggt
ggtcccccccagcctggcatgtcaccgatgtcaggaaatctaattggacctcgtgttcct
ctagcagctccgaatggcatgtatccccctcctgcacagccacctccgccagcagaaggg
gtgaccccacctccggcaggagcccccccggcctcagccgctccctaa
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