Astur gentilis (Northern goshawk): 126038451
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Entry
126038451 CDS
T08649
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03266
Virion - Herpesvirus
agen04514
Cell adhesion molecule (CAM) interaction
agen04517
IgSF CAM signaling
agen04520
Adherens junction
agen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
126038451
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
126038451
04517 IgSF CAM signaling
126038451
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
126038451
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
126038451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
agen04515
]
126038451
04090 CD molecules [BR:
agen04090
]
126038451
Cell adhesion molecules [BR:
agen04515
]
Immunoglobulin superfamily
Nectin family
126038451
CD molecules [BR:
agen04090
]
Proteins
126038451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
ig
Ig_2
I-set
TM_ErbB1
Ig_PVRIG
DUF5849
Protocadherin
Motif
Other DBs
NCBI-GeneID:
126038451
NCBI-ProteinID:
XP_049656146
LinkDB
All DBs
Position
5:5466479..5574222
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AA seq
538 aa
AA seq
DB search
MASQLQTSCRASWWTIGVCILAAALLPGLQAQTVLVNDTVSGFIGTDVVLHCSFTNPLPN
VKITQVTWQKATNGSKQNVAIYNPAMGVSILSPYKERVTFRNPSFKDGTIQLSRLELEDE
GVYICEFATFPTGNRESQLNLTVLAKPTNRMEGTKRPLIAKSGRTEKILVATCTSSNGKP
PSTVTWDTKLKGEAEFQEIRNSNGTITVISRYRLVPSREAHRQQLMCVVNYQLDRFTDSM
TLNVQYEPEVTIEGFDGNWFLNRKDVKLICKSDANPPAHTYEWKLPNGTLPGSVEIQNNT
IYFKGPVSYSVAGTYICEASNAIGTRSGLVEVNVTDKPLPQGAPGGIIGIVGGVIAAALI
IGVAVTVIIVYRRQQKNRTETDNDLIDLPPSHKPAPPPKRKQEMKSHLTAEDIQVVHLDN
MKHEEEIQKIPLQTPYYDMAATEPTPYTDKLNEDQGLRRRNEREWTNFGKCHSEISNASD
YLTRCYSHEDRYLEKIPHVYTPLSDLPRDLYPHHSDISFCCPPPGSRAPYICPKEQYV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagctgcagacaagttgccgtgcatcttggtggactatcggagtttgcatc
ctggcggccgcgctcctaccagggctgcaagctcagactgtcttagtcaatgacacagtc
tcggggtttatcgggacagatgtggtcctgcactgcagcttcaccaatccgctccccaat
gtgaagataacgcaggtcacgtggcagaaagctaccaatggctccaagcagaatgtggcc
atctataaccctgccatgggggtctccatcctctctccctacaaagagcgagtgactttc
cggaatccttccttcaaagatggcaccattcagctctctcggctagagctggaggatgag
ggagtttacatctgtgagtttgctaccttcccaactggcaaccgggaaagtcaactcaac
ctcactgtgctggccaagcccacaaatcggatggagggcaccaagcggccacttattgct
aagtctggcaggacagaaaagatcttggtagctacctgcacctcctctaatgggaagccc
cccagcactgtcacctgggacaccaagctcaaaggggaagcggagtttcaggagatccgg
aatagcaatggcaccatcacagtgatcagccggtaccggctggtgccgagccgggaagcc
caccggcagcagctaatgtgcgtggtcaattaccagctggaccgcttcaccgatagcatg
accctcaacgtgcagtatgagccagaagtcactattgagggctttgatggcaactggttt
ctcaaccggaaggatgtgaagctgatatgcaaatctgatgccaaccccccagctcacacc
tatgaatggaagctgccaaacgggactcttccagggagcgtggaaatccagaacaatacc
atctactttaaagggcctgtctcctacagcgtggctggcacctacatctgtgaggcctcc
aacgccattggtacacggtcgggcttggtggaagtcaatgtcacagataagccactacct
cagggtgccccaggaggcattattgggatcgtgggaggagtcattgcagcagctctcatc
atcggcgtggctgtcaccgtaattattgtctacaggcggcaacaaaagaaccgcactgaa
acggacaatgacctaattgacttgcctccatcccacaaacctgcccctccaccgaagagg
aaacaggagatgaaaagccacctgactgcagaagacatccaggttgttcacttagacaac
atgaaacacgaggaagaaatccagaaaatccctttgcagactccgtactatgacatggca
gccaccgagcccactccctacactgacaaactgaatgaggatcaaggtcttcgtagacgt
aacgagcgagagtggacaaactttggaaagtgtcactcagagatatcgaatgcgagtgat
tacctgacccgctgttactcacatgaagatcgatatctggagaagatccctcatgtctat
acccccttgtcagacctcccacgagatctttatcctcatcattctgacatctccttctgc
tgcccacctcccggttcccgggctccttacatctgtcctaaggaacagtatgtttaa
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