Astur gentilis (Northern goshawk): 126038824
Help
Entry
126038824 CDS
T08649
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03008
Ribosome biogenesis in eukaryotes
agen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126038824
09123 Folding, sorting and degradation
03018 RNA degradation
126038824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126038824
03019 Messenger RNA biogenesis [BR:
agen03019
]
126038824
03009 Ribosome biogenesis [BR:
agen03009
]
126038824
03016 Transfer RNA biogenesis [BR:
agen03016
]
126038824
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126038824
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
126038824
Ribosome biogenesis [BR:
agen03009
]
Eukaryotic type
Pre-60S particles
RNases
126038824
Transfer RNA biogenesis [BR:
agen03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
126038824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
126038824
NCBI-ProteinID:
XP_049657075
LinkDB
All DBs
Position
5:9470263..9522955
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKAPIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRREILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPIAEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKRDQPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSSSPNTSL
TSDGSPSLAGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMG
VFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFIVEQYKTKNTEPVDIPPELCHGIQG
KLTLNENAVLPDQTVESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPAPV
LKPGDWEKTNNDGRPWRPQLSFNRDRKPVHLDQSAFRTLGHTMPRERGMPGMYANAVPLG
TYGSPYTRPLLSGQQQIPKLLSNLRPQESWRGPTPLFQQTPQRTAGAAPLLAWNRMLQSQ
NQYQPSQYQGLGGPMSYPQRPEDRMDRGRQAYGPGRPYPLPPSSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggccttcttccgctggctcagtcgcaagtacccctccatcatcgtcaac
tgcgtggaggagaaggctaaagagtgcaatggcgtcaaggctccaattgatacaagcaaa
cctaaccctaacgaggtggagtttgataacctatatttggatatgaatggtataattcac
ccttgtacgcatccagaagacaagccagcacccaaaaatgaagatgaaatgatggttgca
atttttgagtatattgacaggatcttcaacattgtaagaccaaggcgacttctttacatg
gctatagacggagtagctccacgtgcaaaaatgaatcaacagcggtcaagaagattcaga
gcatcaaaggagggcatggaagctgctgaagagaagcaaaaaataagacgagaaattctg
gcaaaaggtggcattcttcctccagaagaagtgaaagagaggtttgacagcaactgtatt
accccgggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttgaacagtgacccagggtggaagaatttgacagttattttgtctgatgctagtgct
cctggtgaaggtgaacataaaatcatggattacattagaagacaaagagctcaaccaaac
catgacccaaacactcatcattgtctgtgtggggctgatgctgatctgatcatgcttggg
ttagctacacatgaaccaaacttcactataattagggaagagtttaaaccaaataaaccc
aagccatgtgctctttgtaaccagatgggtcatgaggttaaggattgccaaggtttgccc
agagaaaaacaaggcaagcacgatcaatttgcagacagtcttcctattgctgaacaagaa
tttatcttcatccgattatgtgttttgcgagagtatttggaaagagaactcactatggcc
agtttgcctttcacttttgattttgaaagaagtgttgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccatctttggagatcagggagggagcaatt
gatcgcttggttaacatatataaaaatgtggtgcacaaaactggggggtacctcacagaa
agcggttttgtcaacctacaacgggtccagatgatcatgttagctgttggagaagttgaa
gatagtattttcaaaaagaggaaagatgatgatgataactttaaaagacggcagaaagaa
aaaagaaaaagaatgaagagggatcagccttcttttattcctggtggacagttctcccct
caagctctgggaaatcgatcgagtcctcaggcaatcagtaaccctagacaagccgccttt
gagatgagaatgcatgacagacagaattctacaacttcatcgtctccaaataccagcctc
acttctgatggcagcccatccctggcaggaggaattaagcgaaaagctgaagatagtgac
agtgaacctgagccagaggataatatcaggttatgggaaactggttggaaacagcgctac
tataagaacaaatttgatgttgatgcatctgatgagaaattccgtcgtaaagttgtacag
tcctatgtggaagggctctgctgggttctcagatattattatcagggctgtgcatcctgg
aactggtattacccttttcactatgctccgtttgcttctgactttgagggtattgcagac
atgccttcagattttgagaaaggctcaaaaccgtttaagcctcttgaacaacttatggga
gtatttccagctgcaagtggaaattttctgccgccaacatggaggaagctcatgacagat
ccggaatcaagcataattgacttctaccctgaagattttgctattgatttaaatgggaag
aaatatgcttggcaaggtgttgcgttattgccatttgttgatgagcgacgacttagagct
gccctggaagaagtctaccctgacctcactcctgaagaaagcagaagaaatagccttggt
ggtgatgttctctttgttggaaaacaccatccactttgtgactttattgtagaacagtac
aagaccaaaaatacagagccagtggatatacccccagagctgtgccatggaatccaggga
aagcttacactgaatgaaaatgctgttcttccagatcagacagtggagtctcctgttcca
atgctgcgtgatcttgcacaaaattctgcagtcagtatctctttcaaagatccacaattt
gatgaagactttgttttcaaggctatagtgttacctggtgcaaagaaacctgctccagtt
ctgaagccaggagactgggaaaaaaccaacaatgatggcaggccttggagaccgcagctt
agttttaacagagacagaaaaccagtccacttggaccagtcagcattcagaactttgggc
catacgatgccaagggaaagagggatgccaggaatgtatgccaatgcagtacctcttgga
acttacgggagcccgtacaccaggccacttctgagtgggcagcagcagattcctaaattg
ttgtcaaatcttagaccccaggagtcttggcgaggtcctacgcccttgtttcaacagaca
ccacaaagaactgctggggctgctcctcttcttgcctggaaccgcatgctgcaatcccaa
aaccagtaccagccaagtcagtaccaggggctgggcggaccaatgagttacccacagaga
cctgaagatcggatggacaggggaaggcaggcatatggccccgggaggccctacccgtta
ccaccttcctcaggaagatacagctggaattag
DBGET
integrated database retrieval system
