Astur gentilis (Northern goshawk): 126039186
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Entry
126039186 CDS
T08649
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126039186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126039186
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126039186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Collagen
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
126039186
NCBI-ProteinID:
XP_049657862
LinkDB
All DBs
Position
6:complement(17318911..17389526)
Genome browser
AA seq
1321 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKTQAE
IEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMPQGF
QQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGAAGPQGFMGPQGPPGP
QGPPQGMPRPQDLHGHQGMQRHSGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGPQG
PPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLNPR
GMQGPPGPRDNQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTMLGPP
QELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLGDG
PRPPFNQDGQNPGPPPLIPGLGQQGGQGRIGPHNQGPGLNKGDSRGPPNHHMGPLSDRRH
DQNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPDKR
FGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDRY
PRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDTFDSPDENSRGRDH
GVRGRGRGALRGGRKGLLPTPDELPRFEGGRKPEPWDGNREAGPRPDHPPHDGHSPANRE
RSSSLQGMDMASLPPRKRPWHDGPGTSDHREMDAPGGPPEERGKGRGNSGPSQRAPKSGR
SSSLDGDHHDGFHRDEAFGGGPAGGNNPSRGGRSGSNWGRGSNMNSGQSRRGASRGGGRG
R
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccacctcgatttttccatatgccgaggttccagcaccag
gcgcctcggcagttgttctacaaaagacctgattttgcacagcagcaagcaatgcaacag
cttacctttgatggaaagcggatgagaaaagctgtgaaccgaaaaaccatagactacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcaggatattataatgacttggttcctcctattggaatgctgaac
aaccctatgaatgctgtaacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttagtcactggtgcatctagt
ggagagttcactttatggaatggactgactttcaattttgaaacgatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccacggtgcagatgtgaaatgtgttgactggcatccaacaaagggattagttgta
tcgggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactgcatgctcataaaaacacagtgatggaggtgaaactgaatctgaatggc
aactggctgctaacagcttctcgtgaccatctctgtaagctctttgacattcgtaatctg
aaagaagagcttcaggtcttcaggggtcataagaaggaggccacagctgtggcctggcat
cctgttcatgaagggctgtttgccagtggaggatctgatggttctttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgagggaatgatctggagt
ctggcgtggcatcctcttggacacattctctgttcgggctcaaatgatcacaccagcaag
ttttggactagaaatcgtcctggagataaaatgcgagatcgttacaacttgaatctgctg
cctgggatgtcagaggatggtgtggaatatgatgatctggaacccaacagcctagcagtt
attcctgggatgggaatacctgaacaattgaaaatagccatggagcaagagcaaatgggg
aaagatgagtccaacgatattgaaatgacaatcccaggactggattggggaatggaggaa
gtaatgcaaaaggaccaaaagaaggtgccacagaaaaaagtgccctatgcaaaaccaata
ccagcacagtttcagcaggcatggatgcagaataaagttcctttgcctcccccacctgag
ccattgaatgatagaaaggaagatattaagctggaggagaaaaagaagacacaggcagag
attgaacaagaaatggcagcacttcagtacacaaacccgcaactcttggagcaattgaag
attgagagacttgcacaaaagcaagctgagcaagtgcagccaccacctccaggaggctct
cttcacggaccacagccttttccagggcaaggcccaatgtcacagatgcctcaaggattt
cagcagccccttccacctcagcagatgccaatgaatatgcctcagatgggacctcctggt
ccacaaggacagttcagacctccaggaccccaaggacaaatgggacctcaaggtccccct
ttacaccaaggagctgcaggtccacaagggttcatgggaccacaaggacctccaggaccc
caagggcctccacaaggaatgccacggcctcaggacttacatggacatcaaggaatgcag
agacattctggccctcatgggccaatggggcctccaggtccgcagggtaatgctggccca
caaggccacttaggaccacagggtctacctgggtctcagactcatttaggacctcagggt
ccgcctggcccacaaggtcacttgggtcctcaaggtccccctggtggtcaaggaatgcag
gggccacctggtccccgaggaatgcaaggacctcttcctcatggcatgcaaggagctcca
ggatctcaagggatgcagggccctatatctcaagggcctttgatgggacttaatccaaga
gggatgcagggtccaccaggacccagagataaccagggacctactccacaagggatgatg
atgggtcatccacaagaaatgagaggtcctcatatgcaaagtggtttactaggacatggt
ccccaggagatgaggggcctccagggacccccgcctcaaggtacaatgttaggaccacca
caagaattgcgtgggccaccaggtccacaaggccagcagggacctccacaaggctcttta
gtagggcctcaaggaaacatgcaaggacctcagggacaaccgaacccttcaagggggccg
cacccttcccagggccctctgcctttccagcagcagaaaacgcctctgttgggtgacggg
cctcgtcccccatttaatcaggatggacagaacccaggtcctccaccactgataccagga
ctggggcagcagggaggacaaggtcgtattggccctcacaaccagggacctggtcttaat
aaaggtgactcccgtggtccaccaaaccatcacatgggccctctctcagatagaaggcac
gaccagaacagtggtggtcctgatcatgggcctgagagagggttgtttcgaggtggccag
gagtggggtgatggtagagacagcaggggcatgccagatagacgaggacctcacccagat
ttccatgatgactttgatcgaccagatgacttccgtgacgacttccatccagataagaga
tttggccatcgattacgggaatttgaggggagaggaggcccaccattgcaagatgaaaaa
tggagacgaggtggacctgggcctccctttcctcctgatcacagggaatttgaaggaggg
ggttcaaaccgtgggcctcctggtgcttgggaaggacggagaccttcagatgatagatat
ccacgggatcctgaggatgcacggttccgagggagacgagatgagagcttcagaagagga
ggaccctcgagacatgagggtcggggacccagggggagagatggctttcctggccctgaa
gattttgggccagatgacacttttgactctccagatgaaaactcaagaggaagggaccat
ggtgttcgggggcgaggtcgtggtgctcttagaggaggccggaagggtttacttcctact
ccagatgaacttccacgctttgaaggagggcggaaaccagaaccctgggatggaaacaga
gaagcaggtcctcgtccagatcaccctcctcatgacgggcattctccagctaacagagaa
cgttcttcttcgctccagggcatggacatggcctcattgccaccacgtaaacgtccctgg
catgatggaccaggcacctctgaccacagagaaatggatgctccaggtggacctccagag
gagaggggcaaaggacgaggaaattcaggaccttcacagagagcaccaaaatctgggagg
tctagttctttagatggagatcatcacgatggattccacagggatgaagcttttggtgga
ggccctgcaggaggcaataacccttctcgaggaggaaggagtggaagtaactggggaaga
ggcagtaacatgaactctggtcaatcaagaagaggagcatctaggggtggtggacgaggc
cgatag
DBGET
integrated database retrieval system
