Astur gentilis (Northern goshawk): 126039309
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Entry
126039309 CDS
T08649
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126039309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agen04131
]
126039309
Membrane trafficking [BR:
agen04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126039309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
zf-RING_UBOX
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
126039309
NCBI-ProteinID:
XP_049658265
LinkDB
All DBs
Position
6:complement(16065706..16150215)
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AA seq
1397 aa
AA seq
DB search
MEAAPEQGVCPAGAEAEPCPEPPAHRLSAAELDRELDSRSELIDDKEFDIPQVDTPPTLE
SILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLH
GSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLG
STAVGAQYGAVSALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIK
FTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKLELRDHP
ITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAF
CRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQT
QEELETIEIPEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGTKS
VHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLSGDTSKRKAVIADRMVE
ILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRTDLLFNQIYDKMSENSVA
KGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDVTSLDIQQVVL
LCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVIMGNKLLVYISC
CLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEGSVDEEVYPYVRTLLHFDTREFLNV
LALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFV
NRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICEF
MYERELRYDKIIGCYLHDPVRKEEVFNYIHNILSMPGYSAEEKQSVWQEALEHIEELLLL
SPCKAADLVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPREGINQDLIRLPPGITEQFI
ELLCQYSPDQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERL
QSKLLMLMQDDESSAELPLLENIEDTLMKTIALCQRNSHNLDQQQREALWFPLLEAMMSP
QKLSGSSQCRYSEALKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGM
LDTFNYEQTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETADE
IIVFSCGHLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKGGKLSENFSELKKGRGASLA
QASSESLLDPQQIQAFDQLCRLNRGTSRLALLTELSRGHGGEKHGLLSVSHGDPATSSVF
QNENFKLHLAPPPLAED
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccggagcagggcgtctgccccgcgggagcggaggccgagccgtgcccg
gagccgcccgcgcaccggctgagcgcggcggagctcgaccgcgagctggactcacgcagc
gagctgattgatgacaaagaattcgacattcctcaagttgatactcctccaacactggaa
agcatcttaaatgagactgatgatgaagaggagtctttcattttggaggatccctttctc
ttgaacattgataacacagatacacactcctatgacacatcttctgtagcaagctctgac
agcggggaccggacacacctgaaaaggaagaaaaaactcccagattctctctcactccat
ggatcagttatacgtctctcgcttctgaaaggaatttctgcccaaatagtgtctgcagca
gacaaagtggatgctggcttgcccacagcaattgcagcatcaaatctgatagcagtgggg
acttcccatgggttagcactgatatttgatcaaaaccaggcacttcggctgtgtctgggc
agcactgctgttggggcccagtatggggctgtctctgctctcagtatcaacaatgactgt
tcgagactcctgtgtggctttgcaaaaggacagatcacaatgtgggatctggccagtggg
aagctgctacgatcaataacagatgcccacccaccaggaacagccattttgcatatcaag
tttacagatgacccaacgcttgcaatttgcaatgacagcggaggctccgtatttgaactg
tcatttaagagggttatgggagtgaggacgtgtgaatctcgatgtctcttcagtggctca
aagggggaagtttgctgtattgaaccattacatgcaaaacttgagctgagagaccatcct
atcacccaatattcgctgttggccatggcctccctaacaaagatactggttattggcctg
aagccatctctgaaagtgtggatgacatttccctacggtcgtatggacccttctagtgtc
cctcttctggcatggcactttgtggctgtacagaactctgtgaaccccatgcttgcattt
tgtcgaggagatgtcgttcattttcttctggtaaagagagatgatactggtgcaatacat
gtcactaagcagaggcagcttcatctacactatgacctcatcaactttacttggataaac
tcacggacagcagtgcttctggacagtgtagagaagctgcatgttatagatcgtcagaca
caggaggagctggagaccatagagataccagaagttcagcttgtctacaacagcagccac
ttcaaatcactggctacgggaggcaatgtcagcgaagccctggcattggttggagagaaa
gcttgttatcagtccatcagcagctgtggtggccagatcttttaccttggaactaagtct
gttcatgtcatgacattgagaagctggagagagagagttgaccaccttctgaaacaagag
cgtctcacagatgccctggctctagcttggtctttttatgaaggtaaagcaaaggctgta
gtaggcttgtctggggacacaagcaagcggaaagcagtcattgcagacagaatggttgaa
atccttctccattatgctgatcggactttgaagaaatgtcctgaccaaggaaaaattcag
gttatggagcaacattttcaggacgtggtgcctgtcatagttgattactgtcttttactc
cagcgcacggatctattatttaaccagatatatgataagatgagtgagaattctgtagct
aaaggcatctttctggagtgcttggagccatatatcttaagtgataagctgatggggatc
acagctcaagtgatgaaagacttgctgcttcacttccaagacaagaacaggttggaaaat
ttggaagcctgcattgtacatatggatgtcaccagcttagacatacagcaggtagttctt
ctatgctgggaaaatcatctctatgatgccatgatctatgtctacaacagtgggatgaat
gacttcattagtcccatggagaagctgttcaaagtcattgctcctccactgaatgctggg
aagtctctcacagatgagcaggtgataatgggcaacaagctgcttgtatatataagctgc
tgcttggcaggccgtgcatatccattgggtgatattcctgaggatctggtacctttagtt
aaaaatcaggtctttgaatttctcatccggctgcattcagctgagggatctgtggatgaa
gaggtctacccctatgttcgtacattgctgcactttgacactcgggaattccttaatgtt
cttgctctgacttttgaagactttaagaatgacaaacaagctgtggaatatcaacagaga
attgtggacatacttctgaaagtcatggtagagaattctgacttcactccatcacaggtt
ggttgtctctttaccttccttgcccgtcagcttgccaagcccaacaacacgttgtttgtg
aacaggacactttttgaccaggtccttgaatttctgtgcagtccggatgatgactcccgc
cattcagaaaggcaacaggtccttttagaattgctccaggcaggagggatagtacagttt
gaagagagccgtcttatccaaatggcagaaaaagctgaattctatcagatttgcgagttc
atgtatgaacgagagcttcgctatgacaaaataattggctgttacctgcatgatccagtg
agaaaggaagaagttttcaactatattcacaacatcctgtccatgcctggctacagtgct
gaagaaaagcagtctgtgtggcaggaagctttggaacatatagaggagttgctgttgctg
agtccatgtaaagcagctgacttggtagctattcacttcagtgagcagattgagagcatc
attacaaaccttcaggaccagttcttactcttccagtttctgaggagtctccttgatccg
agagaaggcattaatcaagacctgatacgcttaccacccggcatcactgagcagttcatt
gagctgctgtgtcagtacagcccagaccaggttttggagacacttaaagttctggaatac
tgcagactggaagaaaccatccagataacccagaaacatcagctccatgaagcttcttca
tatttactggagaagaagggagatatccatggtgcttttttggttatgcttgagcgattg
cagagcaagttgctgatgcttatgcaagatgatgaaagctcagctgaactccccttgcta
gaaaacattgaagataccttaatgaaaacaattgccctttgccagagaaattcacacaat
ttagaccagcaacagcgagaggccctctggtttcccctgctggaggctatgatgtcccca
cagaaattatctggttcttcacagtgtcgatactccgaagctttgaagagtttgacaatg
caagtgctgaacaacatggctgcatttatcgctcttccttcaatcctgcagagaattcta
caggatccggtttatggaaaagggaaacttggagaaattcaaggacttgtcctgggaatg
ctggacacttttaactatgaacaaaccctgttagagacaactaccaatcttttaaaccat
gatctccactggtccctgtgtaacctaagagcttctgtcactagagggcttactccaaag
caggattactgctgcatttgtctacagcagtacaaaaggcggcaagaaactgctgatgaa
atcattgttttcagctgtggccacttgtaccattcactgtgtctgctgagtaaagagtgc
ggtacggtaactaaaggcttgatgaggtggatgtgctataaatgcaactcaagtaacaag
ggaggaaaactgagtgagaacttctcagagctaaaaaaaggaaggggagcatccttggca
caggcaagttcagagtctctgttggatcctcagcaaatccaagcttttgaccaactctgc
cgactcaaccgaggaacctccagactagctctcctgacagaactgtctcgtggccatggt
ggtgaaaagcacgggctgctcagcgtttcccatggtgacccagccaccagcagtgtcttc
cagaatgagaacttcaagctccatctggccccccctccgctggctgaagactag
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integrated database retrieval system
