Astur gentilis (Northern goshawk): 126039580
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Entry
126039580 CDS
T08649
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126039580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126039580
03012 Translation factors [BR:
agen03012
]
126039580
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126039580
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126039580
Translation factors [BR:
agen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126039580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
Sir1
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
126039580
NCBI-ProteinID:
XP_049658872
LinkDB
All DBs
Position
6:43709218..43731337
Genome browser
AA seq
1008 aa
AA seq
DB search
MRRRAAAVVLGAGCRAAMSYEHRRDWGRGRGGDGGSSSSSSSSSAAAGGHGGRGGGGGGG
GRGRHPSHLKGREIGLWYARKQGQKSKETDRQQRAVVRMDERREEQIVQLLNTVQTKNEK
EQEAMSWWSGDEEGPTPEQPAKVKTDTEKAPVRQRPVLEKTFLDRDVEYLFEKNEQDTDL
DEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQV
TQFILDDYIERGKGSMCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRL
PRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNIRLDL
KVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKK
GFMQGHVSRPEKEEKEEIYRERWPDYLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIR
HIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKT
PPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRK
GRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMD
PPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLT
IAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDY
CWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLY
PKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLY
DCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEK
IENPHPVDWNDVKSRETAVLTAIIDLITTQENESARNYAPRFQSERYS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggagggcggcggcggtggtgctgggagccggttgccgggcggccatgagctac
gagcaccgccgcgactggggccggggccgcggcggcgatggcgggtcctcctcctcctct
tcctcctcctccgctgccgcggggggacacgggggccgcggcggcggcggcggcggcggc
gggcggggccgccaccccagccacctcaagggccgcgagatcgggctgtggtacgcgcgg
aagcagggccagaagagcaaggagacggaccggcagcagagagctgttgtgcgtatggat
gaacgcagggaagagcaaattgtgcagctgttgaatactgtccaaactaaaaatgaaaag
gagcaagaagccatgtcctggtggtctggggatgaagaaggacctactccagaacagcct
gcaaaagtgaaaacagatactgaaaaagctcctgtaagacagagaccagtcttggaaaaa
acatttcttgatcgggatgtggaatatctctttgaaaaaaatgagcaagatactgattta
gatgagcaacttaaagaagacttaagaaagaagaaatctgatcctagatatattgaaatg
cagagattccgagagaaactcccttcatacgggatgagacaggaacttgtaaaccttata
aacaataatcgagtaactgtgataagtggtgaaactggttgtggaaagacaacccaagtt
acacagttcatcttggatgattacatagaacgagggaaagggtctatgtgcaggattgtt
tgtactcagcctaggaggatcagtgctatttcggtggctgagagagttgctgctgaaagg
gcagaagcatgtggtaatggcaagagtacaggataccaaattcgtctacagagtcggtta
ccaaggaaacaaggttcaattttatactgtaccacaggaattgtcctacagtggctccag
tcagataagcacttgtccagcattagtcatgtagtccttgatgaaattcatgaaagaaat
cttcagtcagatgtcttaatgagcattattaaagatcttttgaatattcgtttggatttg
aaagtaatactaatgagtgctactttaaatgcagagaagttttcggagtattttgataat
tgtccaatgattcacatacctgggttcactttccctgtggtggagtatcttcttgaagac
gtaattgagaagttgaggtatactccagagaacacagaccgtcgaccacggtggaagaaa
ggcttcatgcaaggacatgtaagcagaccagaaaaagaagagaaagaggaaatctacagg
gaacgatggccagactatttaaggcagctgcggggcaggtattcagcaagtactatagat
gccttggaaatgatggatgatgacaaggtcgaccttgaccttatagcagcacttatcaga
cacatcgttttggaagaagaggatggtgcaattctagtgtttcttccaggctgggacaac
attagcactttgcatgatctcttgatgtcacaagtcatgtttaagtcagataggtttatt
atcatacctttacattcattgatgcctactgttaaccagactcaggtttttaagaagacc
ccgccaggagtaaggaaaatcgtgattgctaccaacattgcagagactagcattacaata
gatgacgtcgtgtttgttatagatggtggaaaaataaaggaaactcactttgacacacag
aacaacattagcacaatggcagcagagtgggttagtaaagctaatgccaagcagaggaaa
ggtcgagcaggaagagttcagccaggccactgttatcatctgtacaatggactacgtgct
agccttctagatgattaccagttacctgagatcttgaggacacctttggaagagctctgt
ttacaaatcaagattctaaagcttggtggaattgcttattttctgagcaaactaatggat
ccaccatctcgtgatgctgtaatgttggctataaatcatctaatggagctgaatgctttg
gacagacaagaagaactgactccactaggtgtccatttagcacgattaccagttgaacca
catattggaaagatgatcctctttggagctttattctgctgcttggatccagtacttaca
attgcagctagcctcagcttcaaagacccttttgtcattcctctgggcaaagagaaagta
gcggatgcaagaagaaaggagctgtcaaagaacactaaaagtgatcatctaactgtggtg
aatgctttcacgggctgggaagagactcggcgtcgtggtttcagaactgagaaagactat
tgctgggaatatttcctgtcttcaaatacactccagatgctgcataacatgaaaggacag
tttgctgagcatctccttgcagctggatttgtgaatagcagagaccccaaggatcccaaa
tctaataccaactcagataatgagaagctgctcaaagcggtcatctgtgctggcttatat
ccaaaagttgcaaagatccggccaagtttcagcaaaaagagaaaaatggtgaaagtttgc
accaagacagatggaacagttaatattcatccaaaatcggttaatgtggaagaaacggag
ttccattataactggctagtgtaccatttgaagatgagaactagcagtatttacttgtat
gattgtacagaggtctctccgtattgtctcttgttcttcggaggagatatatccattcag
aaggataaagatcaggataccatcgctgtggatgaatggattgttttccagtctccagca
agaatagcgcacttagttaagaatttaagacaagagctcgatgatcttctacaagaaaaa
atagaaaacccacatcctgtggactggaatgatgttaaatccagggaaacagcagtactg
acagctattatagacttgatcacaacacaggagaatgaaagtgccagaaactatgcccca
cgattccagagtgaacgctatagttga
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