Astur gentilis (Northern goshawk): 126040657
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Entry
126040657 CDS
T08649
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1
KO
K11125
protein SMG5
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126040657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126040657
03032 DNA replication proteins [BR:
agen03032
]
126040657
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126040657
mRNA cycle factors
Common to processing body (P body) and stress granule
126040657
DNA replication proteins [BR:
agen03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
126040657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
126040657
NCBI-ProteinID:
XP_049661370
LinkDB
All DBs
Position
7:complement(13127012..13160856)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSQGGGATGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMV
IICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTD
DQEPREPLNSIEKETEADLANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLS
EGFDSDSSQGSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEE
GSGQGKSGPKEALKNCVDGSGLGDSKGPSISKIEAPDPAVNGPASLSANDASIASNLQAM
STQLFQTKRCFRLAPTFSNILLKPNSEPPVLNDGIESKPCVNGDLEKPSLVEQDDVSDSE
ESISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLS
VLLNLLPSAADLQESGLALCNEVKDILSGAELPDLKANLLLPEDVALRNLPPLKNAHKRF
NFEQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQ
AQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQH
LAVVKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVG
KSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSTFSVP
MQSAIQAATNASVEIKNVLEFYKQWKEMG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcggaggggccaccggcgagagcggcgagccggaggccaaggtgctgcac
accaagcggctgtaccgagcagtggtagaggctgttcatcgattggatctcatccttggt
aataaggcagcgtatcaagaagtgttcaagccagagaacatcagcttgaggaacaagttg
cgagagttgtgtgtgaagctgatgttcttgcatccagtggattatggaagaaaagcagaa
gaactgctttggagaaaagtttactatgaagttatccagctcattaaaacaaataaaaag
cacattcacagtcgtagcactctggagtgtgcgtaccggactcacttagttgctggcata
ggattttaccagcaccttctcctctacattcagtctcactatcagctagagctgcagtgc
tgtattgactggacgcatgtaacggaccctctaataggctgcaagaaacctgtgtctgca
tcggagaaggagatggagtgggcacagatggcatgtcacagatgtctggtttatctggga
gatctagctcgctatcagaatgaactggcaggtgtggacacagagttgctggctgagcgg
ttttactatcaagccctttctgttgcaccacaaattggcatgccctttaaccagctgggg
acattggcagggagcaaatactacaatgtggaagctacctattgctacttacgctgtatc
cagtctgaagtgtcctttgaaggtgcctatgggaacctgaagcgactgtatgacaaagca
gccaaaatgtatcatcagttgaagaaatgtgaaaccaggaagttgtctccaagcaagaag
cgaggcaaagacattaagaggttgctggtgagctttatgtacctgcagagtcttttgcag
ccaaagagcagctctctggattctgagctgacatctctctgccagtctgtgctggaggat
ttcaacctgtgcttgttctacctgccctctcctcctaatctgagctcaactagtgaagat
gaagaagagtatgagagtggctactccttccttcccgatctcctgatctttcgcatggtg
atcatctgccttatgagtgttcacagcctcaagagggcaggttcaaagcagtacagtgca
gccattgctttcacgctggccctcttctctcacctgataaatcacgtcaatattcgcctg
caggcagagctagaagaaggggaaaatccagtcccagcctttcagagtgatggcacagat
gaccaggagccgcgggagccattgaactcaattgagaaggaaactgaagctgacttggcc
aatcatcagcccagtgaggaacaacggaagaatgattgcaagaaaagcaagaaatactcc
cgcctttcctgtttgcgccgccgccgccacccccagaaggtggatgagagtgacctgagt
gagggctttgactctgactccagccagggctccataaagggcagtgatggctcagaaagt
ggctcagagaagagtgatgaggaagcagaagctgcttttgatgtggagacggactctgac
atgaacagccaagaatctcggtctgacttggaggacatggaggatgagccaggtgaggag
ggaagcggccaaggcaaaagcggacccaaagaagccttaaaaaactgtgtggatggcagt
gggctgggggactccaagggcccaagcatctctaaaattgaggctccggatccagcagtg
aatgggccagcttccctgagcgctaatgacgcaagcatagccagtaatctccaggccatg
tccacccagctgtttcagaccaaacgctgctttcgcttggctcccactttcagcaacatc
cttctgaaaccgaacagtgaaccacctgtcttgaacgatggaatagagagtaagccatgt
gtcaatggagatctggagaagcccagcttggtggagcaagatgatgtatctgactctgag
gaaagcatttcaagtaacaaatcctgcaggaatgagcggtcccttcaggagaagctagag
atcgtgaccaatgaagggctgcttctcactgtcaaggtgttcctggactggctgaggaca
aacacggacctcatcatcatgtgtgctcagagctctcagagcctgtggaacaggctgtct
gtgctcctgaaccttctgccttctgctgcagacctgcaggaatcagggctggccctatgt
aatgaagtcaaggacattctgagtggtgctgagctcccagacctgaaagccaacttgctg
ctaccagaagatgtggccttgcgaaatcttccccctctgaaaaatgcacacaagaggttt
aactttgagcaggaccggcccattttctcagcagttgaggagtctgttgttcgaatttgc
tgcattcggagctttggccacttcattacccacttgcaaggcagcatcctgcagttcaat
tcagagcttgggatcttcatcagcatagcacagtcagagcaagacaacttgctgcaccag
gcccaagcccagtttcacatggctgcagaggaagctcgtcggaacaggctaatgagagat
atggctcagcttcgactgcagctggaggtttctcagctggagggaagtctccagcagccc
aaagcacagtcagccatgtctccttatcttgtcccggacacccaggctctctgccagcac
ctggctgttgtcaagcagctggccaccagcgggaggttcataatcatcatccctcgaaca
gtgatcgatggcttagacttcctgaaaaaggagaacgcaggtgctcgggacagcatccgg
tatctggaggcagaatttaaaaagggaaacaggtacattcgttgccagaaggatgttggg
aaaagctttgagagacataaactgaagagacaagatttagatgcctggaatctctataaa
atactggacagttgcaaacaactgacagtgtcccaaggaagtggagaggatgacaccaca
gggatggtcaccatcatcacggggtttcagctggaggacccaagcacgttctcggtgccc
atgcagtctgccatccaggcagccaccaatgccagtgtagaaataaaaaatgttctggag
ttctacaagcagtggaaagagatgggctga
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integrated database retrieval system
