KEGG   Astur gentilis (Northern goshawk): 126040659
Entry
126040659         CDS       T08649                                 
Name
(RefSeq) replication factor C subunit 5 isoform X1
  KO
K10756  replication factor C subunit 3/5
Organism
agen  Astur gentilis (Northern goshawk)
Pathway
agen03030  DNA replication
agen03410  Base excision repair
agen03420  Nucleotide excision repair
agen03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:agen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126040659
   03410 Base excision repair
    126040659
   03420 Nucleotide excision repair
    126040659
   03430 Mismatch repair
    126040659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agen03032]
    126040659
   03036 Chromosome and associated proteins [BR:agen03036]
    126040659
   03400 DNA repair and recombination proteins [BR:agen03400]
    126040659
DNA replication proteins [BR:agen03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126040659
  DNA Replication Termination Factors
   ELG1-RFC complex
    126040659
Chromosome and associated proteins [BR:agen03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126040659
DNA repair and recombination proteins [BR:agen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126040659
  Check point factors
   HRAD17(Rad24)-RFC complex
    126040659
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_22 AAA_16 AAA_24 AAA_11 AAA_assoc_2 AAA_lid_RFC1 DEAD AAA_14 nSTAND_NTPase5 RuvB_N DUF815 AAA_5 ResIII AAA_30 AAA_19 PhoH AAA_7 TniB DNAX_ATPase_lid nSTAND3 ATPase_2 TIP49 Thioredoxin_6 AAA_25 IstB_IS21 bpMoxR Hydantoinase_B AAA_28
Other DBs
NCBI-GeneID: 126040659
NCBI-ProteinID: XP_049661373
LinkDB
Position
7:complement(2046464..2049279)
AA seq 362 aa
MARAGGGNLPWVEKYRPQTLSELVSHGDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLRHVIQ
EEGVDVTEDGMKALVTLSSGDMRRALNILQSTTMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKTLKGLALQDILTEIHLFVHRGRGLRGRLPADPGKANHHPPP
GRTDTNHLLLSTVDFPPSIRIQLLIKMADIEYRLAAGTSEKIQLSSLIAAFQVTRDLIVA
EA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcgcgggccggtggcgggaatctgccgtgggtggagaagtaccggccgcagacgctg
tccgagctggtgtctcacggggatatcctcagcaccgtgcagcggttcatcagcgaagat
cggctcccgcatcttcttctttacggtcctcccggtaccggcaagacctcgaccatcctc
gcctgcgccaggcagctctaccgggagcgggagtttggttccatggtgctggagctcaac
gcctccgatgaccgggggatcgacatcgtccgagggcccatcctgagcttcgccagcacc
aggaccatctttaagaaaggcttcaagctcgtcatcctggatgaagccgacgccatgacc
caggatgctcagaacgccctgaggcgagtgatcgagaagttcaccgaaaacacccgcttt
tgcctcatctgcaactacctctccaagatcatccccgccctgcagtcccgctgcacgcgc
ttccgcttcggccccctcaccccggagctgatggtcccccggctgcggcacgtcatacag
gaggagggggtggatgtgaccgaggatgggatgaaggctctggtgaccctctccagcggt
gacatgcgcagagccctcaatatcttgcagagcaccaccatggccttcgggaaagtgaca
gaggagaacgtctacacctgcacgggacaccccctcaagtctgacatcgccaacatcctc
gactggatgctgaaccaggacttttccaccgcctatcgcaaaatcacagagctgaagacg
ctgaagggcttggccctgcaggacatcctcactgagatccatctctttgtgcacagaggt
aggggcttgcggggccggctcccggctgaccctgggaaggccaaccatcatcccccccca
ggccgcactgacacaaaccatctccttctctccacagttgacttcccaccctcaatccgc
atccagctgctgatcaaaatggcagacatcgagtaccggctagctgcggggaccagtgag
aagattcagctgagctccctcatcgcggctttccaagtcaccagggacctgatcgtggcc
gaagcctga

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