Astur gentilis (Northern goshawk): 126042636
Help
Entry
126042636 CDS
T08649
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
126042636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
agen04040
]
126042636
Ion channels [BR:
agen04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
126042636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Lig_chan
SR-25
Motif
Other DBs
NCBI-GeneID:
126042636
NCBI-ProteinID:
XP_049665982
LinkDB
All DBs
Position
9:16892492..17424201
Genome browser
AA seq
1274 aa
AA seq
DB search
MANGSGGGGGSYPGGGGGGGGGGGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTME
VPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGD
TQVDGTCKPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIY
FIDSSKSRTADSLIPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVN
SVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIF
ISTWLTAAGFIHLVENSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRL
FMVFFILGGLAMFARYVPEIAALILNRKKYGGTFNSTRGRKHIVVCGHITLESVSNFLKD
FLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADAC
LILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDD
AICLAELKLGFIAQSCLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLS
SAFVGLSFPAVCELVFAKLKLLMIAIEYKSEKRESSILINPGNHVKIQEGTLGFFIASDA
KEVKRAFFYCKACHDDITDPKRIKKCGCKRPTRRAKHMESMPDVEGMYALPNILEKNCSR
TVYPCENVTFELLPKPMRLLIEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPG
NEQIDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALI
GLRNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAV
NINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMD
RSSPDNSPVHGLLRQPSITTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACG
TAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLANR
DRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRY
VITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKSSSVHSIPSTANR
PNRTKTRDSREKQNATRMNRMGQAEKKWFTDEPDNAYPRNIQIKPMSTHMANQINQYKST
SSLIPPIREVEDEC
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggcggcggctcctacccgggcggcggcggcggcggcggc
ggcggcggcggcattagaatgagtaacaatatcaacgccaacaatctcaacacagactcg
tcctcctcccccgtcaatgtgcccaagatggatgcgctcatcatcccggtgaccatggag
gtgccctgcgatagccgcggacagcgcatgtggtgggctttcctcgcctcatccatggtc
actttctttgggggactgtttatcatcctgctgtggaggaccctcaagtacctgtggact
gtctgctgccactgcggggtcaaaaacaaggaggcccagaagatcaatggtggtggagat
acacaggtagatgggacctgcaaaccaacagatgaaaaagaggagaatgtggcagcagaa
gtgggatggatgacctccgtgaaggactgggcaggagtcatgatatctgcccagacgtta
actggcagagtacttgttgtcctagtcttcgctcttagtattggtgctcttgtaatatac
ttcatagattcatcaaagagccgtacagcagactcattgatcccaatagaatcctgccag
aatttctacaaagatttcacattacagatcgacatggctttcaatgtgttcttcctactc
tacttcggcttgcgtttcatagcagccaatgacaagctatggttttggctagaagttaac
tcagtagtagatttcttcacggtccctccagtgtttgtgtcagtatatttaaacagaagt
tggctgggcttaaggtttttaagagcccttagactgatacagttttcagaaattttgcag
tttctgaatatccttaaaacaagtaattccatcaagctagtgaatctgtgctctatattt
atcagcacgtggctgacagcagctgggttcatacatttggtggagaactcaggggatcca
tgggaaaatttccaaaataatcaaccactaacatattgggaatgcgtttatttactgatg
gttacaatgtccactgttggctatggagatgtttatgcaaaaacaacccttggtcgcctt
ttcatggtcttcttcatccttgggggattggcaatgtttgctcgctacgtgccagaaatt
gctgctctcatccttaatcggaagaaatacggcgggacttttaactcaactcgaggcaga
aagcacatagttgtctgtggtcacataacacttgaaagtgtgtccaacttcctgaaggac
ttcctgcacaaggatagggatgatgtcaacgtagaaatcgtctttctgcataatatctcc
cctaaccttgagctggaagctctttttaaacgacacttcactcaggtggaattttatcag
ggttcagtccttaatccccatgacctggcgagagtgaagatagagtcagcggatgcgtgc
ctaatccttgccaataaatactgcgctgacccagatgctgaagatgcctccaatattatg
agagttatttcaataaagaattatcatccgaagataagaattatcactcagatgctgcag
tatcacaataaggcccatctgctaaatatcccaagctggaactggaaagaaggggatgat
gcaatctgtcttgctgagctcaagctcggtttcatagcccagagctgcctggcaccaggc
ctttcaacaatgttagccaacctcttctctatgaggtcattcataaagattgaggaagat
acatggcagaaatactacctggaaggagttgcaaatgaaatgtatacagaatacctgtct
agtgcctttgtgggtttgtccttccctgcagtttgtgaactggtgtttgcgaaactaaag
ctcttaatgatagccatagaatacaagtcggaaaaacgagaaagcagtatattaatcaat
cctggaaaccatgtcaagattcaagaaggtactttaggattcttcattgcaagtgatgcc
aaagaagtaaaaagggcatttttttactgcaaggcctgtcatgatgacatcacggatccc
aaaaggataaaaaaatgtggctgcaaacggcccacaaggagagcaaagcacatggaaagc
atgcctgatgtggaaggaatgtatgcattgcctaacatattggaaaaaaattgttcaaga
acagtttatccatgtgagaatgtgacctttgaactgctgccaaagccaatgaggctgctg
attgaagatgagcaaccgtcgacactatcacccaaaaaaaagcagcgaaatggaggcatg
cgaaattcacccaactcctcacccaaactgatgaggcatgaccccttgttaattcctggc
aacgagcagattgacaatatggatgccaatgtgaaaaaatatgactctacagggatgttt
cattggtgtccagccaaggacattgaaaaggtcattttgactcgaagtgaagcagcgatg
acagttttaagtgggcatgtagtcgtttgcatatttggggatgttaaatctgctttgatt
ggattaagaaatttagtgatgccattacgagccagcaactttcactaccatgaactcaag
cacattgtgtttgtgggttcacttgaatacctgagaagggaatgggagacactgcataac
ttccccaaggtttcaatcttgcctggtacgccattaagtcgggctgatttaagggctgtc
aacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgat
gcttcgctgcaggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagttt
gatgacagcattggggtcttgcaggctaattcccaaggctttacaccccctgggatggat
aggtcatctccagacaacagtccagtccatggcctgttacgtcaaccctccattacaaca
ggagccaacatccctattataacagagctagtaaatgattcaaatgttcagttcttggac
caagatgatgatgatgatccagacacagaattgtatctcacgcagccctttgcatgtgga
accgcatttgctgtcagtgtgctggactctctcatgagcgcaacatacttcaatgacaat
atcctcacactgatacggaccttggtaacaggaggagccacaccagagctggaagcactg
attgctgaggaaaatgcattgagaggaggttacagcacgccccagacacttgcaaacagg
gacaggtgtcgagttgctcagttggctttgtatgatgggccgtttgcagacctaggggat
ggaggttgttacggagatctattttgtaaagcactgaaaacatacaatatgctttgcttt
ggaatttatcgattaagggatgcacatctaagtactcccagccaatgtactaaacgttat
gttatcacaaacccaccatatgaatttgagcttgtgccgacagacttgatcttctgtttg
atgcaatttgaccacaacgctggccagtcccgggccagtctttctcattcctcccattcc
tcctattcttccagcaagaagagctcatcagttcactccatcccatcaacggcaaaccga
ccgaaccgcaccaagaccagggattcccgggaaaaacagaatgcaacaaggatgaataga
atgggccaagcagaaaagaaatggtttacagatgagccggataatgcctatcccagaaac
attcaaatcaagcccatgagcactcacatggccaatcagatcaatcaatataaatcgaca
agcagcttgataccaccaatcagagaagttgaagatgaatgttga
DBGET
integrated database retrieval system
