Accipiter gentilis (Northern goshawk): 126043362
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Entry
126043362 CDS
T08649
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
agen
Accipiter gentilis (Northern goshawk)
Pathway
agen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126043362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agen03041
]
126043362
03009 Ribosome biogenesis [BR:
agen03009
]
126043362
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126043362
Spliceosome [BR:
agen03041
]
Complex A
U1 snRNP components
U1 related factors
126043362
Complex B
126043362
Ribosome biogenesis [BR:
agen03009
]
Eukaryotic type
Pre-60S particles
Helicases
126043362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
126043362
NCBI-ProteinID:
XP_049667600
LinkDB
All DBs
Position
10:complement(36779183..36786345)
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AA seq
603 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTVQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERNYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTS
YSQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagccccccgtttcggaggaagt
agaggtggacctctttctggaaagaaatttggaaatcctggggaaaaacttacaaaaaag
aaatggaatttagatgagctgcccaaatttgagaagaacttctatcaagaacatcctgat
gtagtgagacgtactgtgcaagaagttgaacagtacagatcaagcaaagaagtcacagtt
aggggccataactgtccaaaaccaattataaacttctatgaagctaactttcctgcaaac
gttatggaagtaattcagaggcagaacttcactgaaccaactgctattcaagcacaagga
tggcctgttgcattgagtggattggatatggttggagtggcgcagactggatcagggaaa
acactgtcttacttgttgcctgctattgtgcatataaatcaccagccattcctggagcga
ggagatggacctatttgtcttgtgctggcaccaactcgtgaactggctcaacaagtgcag
caggtagctgctgaatatagcagagcatgccgtttgaagtctacatgtatttatggaggt
gctccaaaaggaccacagattcgtgacttagaaagaggtgtggaaatctgcattgcaaca
cctggaagacttatagacttcttggaagctgggaagaccaatctcaggaggtgtacttac
cttgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcagatcagaaaa
attgtggatcagataagacctgacaggcaaactctgatgtggagtgccacatggccaaag
gaagtaaggcagctggctgaagactttttgaaagaatatgtacacatcaacattggtgca
ttagaactaagtgcaaatcacaacattcttcagattgtggatgtgtgtcatgatgtagag
aaagatgacaagcttattcgtttgatggaagaaataatgagtgagaaggaaaataaaaca
attgtttttgtggaaaccaaaagacggtgtgatgatcttaccaggaaaatgaggagagat
gggtggccagcaatgggtattcatggtgataaaagtcagcaggagcgtgactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccga
ggtgatcgacgtgacagatattctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaaactatggtgcactaggaaagagagactttggagcaaaaact
caaaatggggcctacagtgcccaaagtttcagtaatggaactccttttggaaatggcttt
gcagctgcaggcatgcaagctggcttcagggctggtaaccctgcaggagcttaccagaat
ggctatgatcagcagtatggaagtaatattgcaaatatgcacaatggcatgaaccaacag
cagtatgcatatcctgccactggtgctgctcctatgataggttacccaatgccgacaagt
tattctcaataa
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