Astur gentilis (Northern goshawk): 126044560
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Entry
126044560 CDS
T08649
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03018
RNA degradation
agen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126044560
09123 Folding, sorting and degradation
03018 RNA degradation
126044560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126044560
03041 Spliceosome [BR:
agen03041
]
126044560
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126044560
mRNA degradation factors
5'-3' decay
Lsm complex
126044560
Spliceosome [BR:
agen03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126044560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
126044560
NCBI-ProteinID:
XP_049670366
LinkDB
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Position
11:complement(27544978..27552176)
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgctttggagaattacatcaaccgtactgttgcagtaattacttctgatgga
agaatgattgtgggaaccctcaaaggttttgatcagacaattaatttgattttggatgaa
agccatgaacgagtgttcagttcttcacaaggtgttgagcaagtagtgctgggattatac
attgtaagaggtgataacgttgctgtcattggtgaaattgatgaagagacagattcagct
cttgacttggggaatattcgagcagaacctttaaactcagttgtgcattga
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