Astur gentilis (Northern goshawk): 126044621
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Entry
126044621 CDS
T08649
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03020
RNA polymerase
agen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126044621
09124 Replication and repair
03420 Nucleotide excision repair
126044621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126044621
03400 DNA repair and recombination proteins [BR:
agen03400
]
126044621
Enzymes [BR:
agen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126044621
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126044621
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126044621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
126044621
NCBI-ProteinID:
XP_049670499
LinkDB
All DBs
Position
12:2852381..2873910
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcagtacgatgaagacgatgatgaaatcacccccgac
ttgtggcaagaagcctgctggatcgttattagctcctattttgatgaaaagggcttagtc
aggcaacagttggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgccacaggagaagtggaagag
ccgccccggtatctgttgaagtttgaacaaatctatctctccaaacctacccattgggaa
agagatggagcaccttcacctatgatgcccaatgaagccagactgagaaaccttacgtat
tcagctcccttgtatgtggatataactaaaacagttattaaagaaggagaggatcagtta
cagacacagcatcagaaaacttttataggaaaaattcctattatgttacgttcaacatac
tgtttgttgaatggcttaactgaccgtgatctttgtgaactgaatgaatgcccgcttgat
cctggtggctactttatcattaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggttagcatgctg
gccagaggtgggcagggtgcaaagaagagtgctattggtcagcgcattgtagcaactttg
ccatatatcaaacaagaagtccccatcataattgtcttccgtgcactaggctttgtgtcc
gacagggacattttagagcacatcatatatgattttgaagatccagaaatgatggaaatg
gtcaaaccttctctggatgaagcgtttgtcattcaggagcaaaatgttgctctaaacttc
attggatcaagaggtgcaaagccaggtgttaccaaagaaaagagaatcaagtacgctaaa
gaagtcttgcagaaagaaatgctcccacatgttggtgtcagtgacttctgtgaaaccaag
aaggcctattttctagggtatatggttcatagattgttgctggcagcactgggaagaaga
gagcttgatgacagagatcattatggcaacaaaagactggatcttgctgggccactgtta
gctttcctattcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaggatttcaacttggaactggcaattaaaacaagaattatt
tcagatggtttgaagtattcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcctgacttttgcatctacgctttcc
catctgagacgcctgaattctccaattggtagagatggaaaactagcaaagcccagacag
ctgcacaatacgctgtggggaatggtttgccctgctgagaccccagagggtcacgcagta
gggcttgtgaagaacttggccctgatggcttacatttctgtggggtctcagccatcccca
attttggaattcttggaggagtggagtatggaaaacctggaagaaatatctccagcagca
atagctgatgctaccaagatctttgttaacggctgctgggtaggcatacacaaagatcca
gagcagctcatgaataccctaaggaagctccgtcgtcagatggacatcattgtgtcagag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctatactgacgcaggcaga
atttgtcgaccccttttaattgtggaaaaacagaagttgctgttgaaaaaaaggcatatt
gaccaattgaaggaacgagagtataacaattacagttggcaggatctcgtggccagtggt
gtagtagagtacattgatacactggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacgcactgtgaaattcaccca
tctatgatcctgggagtatgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaaacaggctatgggagtttacattacaaacttc
catgttcgtatggatacgctggcacatgtgttgtattatcctcagaagccccttgtaaca
acacgctccatggagtacttgcgatttagagaattaccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttctatcgttcatacaaagagcaagagtctaaa
aaagggtatgaccaggaagaagtttttgaaaagcctacgcgtgaaacttgccaaggtatg
agacatgcaatctatgacaaacttgatgatgatggtttgatagcacctggggtgcgtgtg
tctggggatgatgtcatcattggcaaaacagtaacgctgccagaaaacgaagacgaactg
gaaagcactaacagacgtttcacaaagagggactgtagtacttttctgcgaactagtgag
actggtattgtagatcaggtcatggtaacacttaaccaggaaggatacaagttctgcaag
attagggtacgctctgtaagaatcccacaaattggagataagtttgccagcagacacggg
cagaaaggaacttgtggtatccagtacaggcaagaggatatgcccttcacctgtgaaggc
atcacacctgatataattatcaaccctcatgccatcccttcccgcatgaccattggtcac
ttgatcgagtgtcttcaggggaaggtgtctgcaaacaaaggagaaattggtgatgctaca
ccttttaatgatgctgtcaatgtgcagaagatttccaatcttttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcgcag
atcttcattggtcctacatattatcagcgattgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccagatacttaacagacagcccatggagggtagatctcgt
gatggtggtcttcgttttggagaaatggaacgcgattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccgtaccaagtccatgtctgtaac
ctctgtggaatcatggcaattgcaaacacaaggactcacacctatgaatgccggggatgc
cgcaataaaactcagatatctttggttcgaatgccctatgcctgcaaactcctcttccaa
gaactgatgtctatgagtattgcacctcgtatgatgagtgtttag
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