Accipiter gentilis (Northern goshawk): 126044967
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Entry
126044967 CDS
T08649
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
agen
Accipiter gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
agen00536
]
126044967
Glycosaminoglycan binding proteins [BR:
agen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126044967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
126044967
NCBI-ProteinID:
XP_049671372
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Position
12:32129651..32447590
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AA seq
806 aa
AA seq
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MGGGGKEIKAAAAEGCKSMLGKSRGAAGRDGSGKPGCGGDRCPRRAGPCGSALAALLSAL
AAASCVYLGVRTSDLQARVAAIEGARGGFSAAAAAPLPPLPGFSLEQLNAMMQEKVERLL
AQKSYEHLAKIRVAREAPPECNCPPGPPGKRGKRGRRGETGPPGLPGRNGYPGPIGMDGK
LGQPGPQGPPGPKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGP
PGPPGPRGPPGDTGKDGPRGMPGIPGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDGQ
VGEPGLPGIAGEKGAAGLKGDPGERGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGES
GRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPG
VPGPKGKTGEPGSRGPKGSKGDTGDRGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEAL
QRIATLTVTGPPGPPGPQGLQGPKGEPGSPGTPGVDGEQGPKGSKGDTGDPGMPGEKGGI
GLPGLPGANGMKGEKGDVGLPGAQGPSMIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNG
LKGLKGEPGQKGDRGPLGLPGASGLDGKPGPRGVDGPVGPHGPAGPKGDRGEKGTVGDPG
PRGPYGLPGKDGEPGLDGFPGPRGEKGDIGEKGEKVTTGEKGKKGKKGPKGEKGEQGAPG
LDAPCPLGPDGLPMPGCWQKVGWAELFLFRGSTSLAHRKACHSHTEQYQDILQSLLDRCM
QQCKIRPLHGSSGCDEVVIHVEVITH
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggaggaaaggaaatcaaagccgccgcagctgaagggtgtaaaagcatgctg
ggcaagagccgaggagccgcaggacgggatggcagcgggaagcccggctgcggcggggac
cgctgcccgcggcgggccgggccgtgcggctcggcgctggcggctctcctctcggcgctg
gcggcggcctcctgcgtctacctgggggtgcggaccagcgacctccaggccagggtcgcg
gccatcgagggcgcccgagggggcttctctgccgccgccgccgccccgctcccgccgctg
cccggcttttccctggagcagctgaacgcgatgatgcaggagaaagtggagcgacttctc
gcccagaaatcctacgagcacttggcaaaaatacgagtagcgagagaagcgcctccagag
tgcaactgcccaccaggtcctccagggaaaagaggtaagcggggcagaagaggagagact
ggacctcctggtctaccagggcgaaatggctatccgggtccgattggtatggatggaaag
ctgggtcagcctggtcctcaaggccctcctggtccaaagggcgagaagggagatcaaggt
gatcagggccctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcag
cagctcattaaacgccgcctcattaagggggatcaaggacaagctggaccccctggacct
ccagggccaccaggacccagaggtcccccaggagataccggcaaagatggtcctcgtggg
atgcctggcataccgggtgaaccaggaaaaccaggagaacaaggattgacaggacctcag
gggcctccaggacaaaagggttctgtcggagtgcctggtgttccagggagagacggacaa
gtgggtgaacctggtctgcctggcatagcaggagagaagggagcagcagggcttaagggt
gaccctggagaaagaggagaaaagggtgatgctggagaaaatggaccgaagggtgacaca
ggagaaaagggtgaccccggttcttctgctgcaggaattaagggtgaacctggtgaatct
ggacggcctggacaaaagggtgaaccaggtcttcctgggcttcctggactccctgggata
aagggtgaaccaggtttcatcggtccgcaaggagaaccggggttgccagggctgccagga
acaaagggtgacagaggagaggcaggccctgttgggaagggtgagcgaggtgaacctgga
gtccctggaccaaaggggaaaacaggtgaacctggatctagaggcccaaaagggtcaaag
ggtgataccggggatagaggtgacacgggatctgcaggtccacggggaccacctggacag
aagggtgaccaaggtgcaacagagataattgattataatggcaacatccatgaagctctg
cagaggattgccaccctgactgtcacggggccaccaggaccaccaggaccccaagggctg
caagggccaaagggtgaaccaggatccccaggaactccaggtgtcgatggggagcagggt
cctaaaggctcaaaaggagatacaggtgatcctggaatgcctggagaaaagggaggaatt
ggactgcctggcctgccaggagccaatggtatgaaaggcgaaaaaggagatgttggtttg
cctggtgcccaaggtccttcaatgataggaccacctggaccaccagggccacatggtcct
ccaggccctatgggacctcatggactgcctggcccaaagggtgaaccagggttaaatggt
cttaaaggattgaagggtgaaccaggtcaaaagggtgacagagggccccttggtcttcca
ggagcatctggcttagacggaaagccaggaccccggggtgtagatggccccgttggtccc
catggcccggcaggtcctaaaggagacagaggtgaaaagggaactgtaggtgaccctgga
cccagaggaccatacggcttgcctggcaaagatggcgagcctggccttgatggtttccct
ggtcctcgaggagaaaagggtgatataggagaaaagggagaaaaggtgaccacaggggaa
aagggaaagaaaggcaaaaaggggcctaaaggggagaaaggagaacagggtgctcctgga
ttagatgcaccttgcccattgggtcccgatggattaccaatgcctggctgttggcaaaag
gtaggatgggcagagctttttcttttcaggggcagtacgtccttggcacatagaaaagcc
tgtcacagtcatactgaacagtatcaggatatacttcagagcctcttagacagatgtatg
cagcaatgcaaaataagacctctgcatggcagtagtgggtgtgacgaggttgtaatacat
gtagaagtaataactcattga
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