Astur gentilis (Northern goshawk): 126045820
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Entry
126045820 CDS
T08649
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03015
mRNA surveillance pathway
agen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126045820
09123 Folding, sorting and degradation
03018 RNA degradation
126045820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126045820
03041 Spliceosome [BR:
agen03041
]
126045820
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126045820
mRNA cycle factors
Stress granule specific factors
126045820
Spliceosome [BR:
agen03041
]
Complex C
Other components
Complex C specific factors
126045820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_RdRP1_2
ATP-grasp_2
DUF6262
DUF1464
Motif
Other DBs
NCBI-GeneID:
126045820
NCBI-ProteinID:
XP_049673310
LinkDB
All DBs
Position
14:complement(22796014..22809292)
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AA seq
535 aa
AA seq
DB search
MDDPVGVRHALGGGEGRSGVGGGEESSPYLAPLPWEAELPVSFRLTSLCPTVSLIPVPVS
AAVGCEGDLFLLPSSLPPVLTSLPAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGN
VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNG
MLLNDRKVFVGHFKSRKEREAEFGSRAMEFTNVYIKNFGDDMDDDRLQEIFSKFGKTLSV
KVMMDSTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRIVYVGRAQKRLERQSELKRKF
EQIKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCF
SSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSF
QPPPGYFLPPLPQAGEPAVHVQGQEPLTASMLAAAPPQEQKQMIGERLYPLIHATHPSLA
GKITGMLLEIDNTELLLLLESPDSLHCKIEEAVAVLQAHQATETSHKSSTTAFLQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcctgtgggagtcagacatgctttgggggggggggaaggaaggagtggtgtg
ggcggaggggaggagagcagcccctacctggccccgctgccctgggaggcagagctgcct
gtctcatttaggttaacaagcctctgtccaacagtatccctgattcctgtgcccgtctca
gctgctgtaggatgtgaaggagatctgtttctgttaccctcctctcttccccctgtactc
acttctttaccagctgaacgagccctggacaccatgaactttgaagtgatcaaaggccgt
cccatccgcatcatgtggtcccagcgggaccctgggctcaggaagtcgggggttggaaac
gtcttcatcaagaacctggatgactccattgataacaaagccctgtacgacactttctct
gccttcggaaacatcctgtcgtgcaaggtggtttgtgatgaaaacggatcccgtggctat
ggctttgttcactttgagactcacgaggcagcgactcgggccatcgagaccatgaatggg
atgttgctcaacgaccggaaggtatttgttggccatttcaaatcccgcaaagagcgtgag
gcagagtttgggtctagggcgatggagttcaccaacgtctacatcaaaaactttggggat
gacatggatgacgacagactgcaggaaatattctccaagtttggaaagacgctaagtgtc
aaagtcatgatggacagcactggccgctcaaagggctttggatttgtcaacttcgagaag
cacgaagaagcccagaaggcggtggccgacatgaacgggaaggagatcaacgggcggata
gtgtatgtgggccgagcccagaagcggctggagcgccagagcgagctgaagcggaaattt
gagcagatcaagcaggagcgagtgagcaggtaccagggggtcaacctgtacgtgaagaac
ctggatgatgggatagacgatgagaggctgaggaaggagttctctccttacggcaccatc
accagtgccaaggtgatgacagagggtggccacagcaaagggtttgggtttgtatgtttt
tcctccccagaagaggctaccaaggccgtgacggaaatgaatggacggatcgtcagcact
aagcccctctacgttgcgctcgctcaaaggaaagaggagcggaaagcaatcctcaccaat
cagtacatgcagagattagccaccatgagggccctgcctggccctctcctgggctccttc
cagccccccccagggtacttcctaccccccctcccgcaggcgggagaacctgctgtgcat
gtccaggggcaggagccgctgacagcatccatgcttgcagcagcccctcctcaggagcag
aagcaaatgataggtgagcgcctctaccctctgatccatgcaacgcatccctcgctggct
ggcaagatcactgggatgctgctggagattgataatactgagctgctgctgctcctagag
tcccccgactccctgcattgcaagatcgaggaagcagtggctgttctccaagcgcaccag
gctaccgagacatcgcacaagagcagcaccacggcattcctgcagtga
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