Astur gentilis (Northern goshawk): 126046142
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Entry
126046142 CDS
T08649
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04510
Focal adhesion
agen04512
ECM-receptor interaction
agen04518
Integrin signaling
agen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126046142
04518 Integrin signaling
126046142
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126046142
09142 Cell motility
04820 Cytoskeleton in muscle cells
126046142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
agen00535
]
126046142
Proteoglycans [BR:
agen00535
]
Extracellular matrix (ECM) proteoglycans
Others
126046142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
126046142
NCBI-ProteinID:
XP_049674109
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Position
15
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AA seq
919 aa
AA seq
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MKSNWKITACFYLCSFLWSFISATIQQQSRLPVILGASQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIQRVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGMDGSLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCIKIESLNIKPKGKISIDGFAVLGKLKNNPEISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGFPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGVKGIPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLPGG
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDPGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAASLK
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGLKGYPGPRGLPGEPGKPSYGREGRDGERGLPGVAGQPGVPGPPGPPGPPGYCE
PSSCRMQAGQRAGKNTKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagcttgcttttacctgtgtagttttctgtggtctttc
atctcagccaccatccagcaacaatcaagactaccagtcattctgggtgccagtcagaga
actgatctctgcccaacaatcagaattggccaagatgacttaccaggctttgacctgatt
tctcagttccaaatagaaaaagctgcttcccaaggaataatccagagagtagtgggctcc
acttctctccaagtggcttacaaattgggacccaatgtagacttcaggatcccaaccagt
gccatatattccaatggattgcctgatgaatattcctttctaactacttttcggatgact
ggggccacgcttcagaaatactggactatttggcagattcaggattcttcaggaaaagaa
caagttggagtgaatcttaatggtcaaatgaaaagtgttgagttctcttataaaggaatg
gatggaagtctccaaactgcatcatttttgcatttgcctttcttgtttgactcccaatgg
cacaaacttatgataagtgtggaagcaaacagtgtcactctttttattgactgtattaaa
atagaatccttaaacataaaaccaaaagggaaaatcagcattgatggctttgctgtgctt
ggaaaacttaaaaataatcctgaaatttcagttccgttcgaaatccagtggatggtgatt
cactgcgaccccctgcgaccccagcgcgaaggctgtggcgagctgccggcccggataagc
cagacggtgatcgagagaggtctccctgggccaccaggccccccaggtccgccagggcca
ccaggagttcccggtattgatggcattgatggggagagaggtcctaatggcccccctggt
ccaccgggtccagacggggatgcaggcaaaccaggatccccaggcctgcctggagagcca
ggagctgatggattcacaggacctgatggctcacgtggagccacaggaccaaaaggacag
aagggtgagccaggactgccaggtgctcgtggatttccaggcaaggggcttcttggacca
cctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgctggtccacctgga
gatccaggaaaaagagggccaccagggccaccaggaccaccaggtcctcgggggacaatt
ggcctgcaagatggtgacccattgtgtcccaatgcttgtccacctggccgcccaggacat
gctggtttaatgggaatgaagggacagaaaggttcaaaaggagagtctggtgaacccgga
aaacaaggttataagggtgaagaaggggaccaaggacccagtggcgaagtgggagctcaa
ggccctccaggcattctaggtatcagaggtataactggtataatgggacctaaaggtacc
aaaggagctcgtgggcttgatggtgagcctgggccccaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccattgggagaggcaggtccgaagggtgaaagaggacctcaa
ggtacaagaggaataaatggtctccctgggcctaaaggagagtctggcttaccaggagtc
gatggccgggaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaacctgga
gctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggtgtgaaa
ggcattcctggcccaaagggtaatagaggtccccctggggtgccaggtttgatgggaaat
tctggtaaaccgggtgaacagggaccggagggagaagcaggtccaacaggaccccgagga
ccaccaggtagcagaggggagccaggtcctgcgggtcctccaggtctaccaggaaaatgg
ggtccccaaggtgatattggacttcctggactgccaggtcctccaggcctacctggtggt
aagggtgaccggggttcagtgggggaaccaggacctaagggtgaacaaggtgcacctgga
gcagaaggagatggaggagaaaagggtgacttaggtgatatgggattaccaggagcaaag
ggagctgttggtaatcccggagaccctggttcccgtgggcctgagggaagtcggggactg
cctggcatggaagggccacgaggttcacctggaccgcgaggcttgcagggtgaacagggt
gccccaggtctgcctggcagccaaggtccagctggaaaagaaccaaccgatcagcatatt
aagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagtcttaaa
aggccagaatttggtgctccaggtcttcctggccgaccagggccaccaggtgctccaggg
cctgctggcgaaaatggcttcccaggacagcttggacctcgtggcttgcctggacttaaa
ggtccccctggtgagattggtcgtaaaggtcctaaaggtgaaccaggagaaagaggagaa
agaggatttccaggcagaggactgaaaggttaccctggaccaagaggtcttccaggtgaa
ccaggcaaacccagctacggcagggaaggccgtgatggtgaacgaggtctccctggggtg
gccggtcagcctggggttcctggtcctcctggccctcccggccctcctgggtactgcgag
ccatcatcttgcagaatgcaagctggacagagagccggtaagaacacgaaagggccgtga
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