Astur gentilis (Northern goshawk): 126046403
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Entry
126046403 CDS
T08649
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agen03041
]
126046403
03016 Transfer RNA biogenesis [BR:
agen03016
]
126046403
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126046403
Spliceosome [BR:
agen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126046403
Transfer RNA biogenesis [BR:
agen03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
126046403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
126046403
NCBI-ProteinID:
XP_049674699
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All DBs
Position
16:17506102..17526295
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGNVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVLVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggcttcttcctacagatatccaagcagaatccatcccactgatcctgggaggtggt
gatgtgcttatggctgctgaaacggggagtggaaaaactggtgcttttagcattccagtt
atccagattgtttatgaaacgctgaaggaccagatggaaggcaagaaagggaaagcaact
attaaaactggtggggcagtgctcaataaatggcaaatgaacccgtatgatagaggatca
gcttttgcaattggatcagacggtttgtgttgtcaaagcagagaggtaaaagaatggcat
ggatgcagagcaactagaggcgtgactaaagggaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcactagatttggggact
gataaatttggctttggctttggtggtactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacaattgggtgttatctagatatagataaa
ggacaaataaaattttccaaaaatgggaaggaccttggtcttgcgtttgaaatcccacca
cacataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagaagacttcaagtttccaccaaaagatggctatattggtctttgcaag
gctcctgatggtaatgtggtaaaatcacaacactcaggaaatgcacaagtggttcaaaca
cagaaccttccaaatgctccgaaagcgttgattgtagagccatcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatatgttgataatcccaaattaagggaa
ctgttgattattggtggggttgctgcaagagatcaactctctgtactggaacaaggagtg
gatattgttgttggaactcctggaagactggatgacctggtctcaacaggaaagcttaat
ttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacgtcagatggaaagaga
cttcaggtgattgtgtgctctgcaacactacattcttttgatgtgaaaaaactgtctgag
aagatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcttgtaaatccgaaagctgacaaactctgggaaaggcttggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacgcgacctggcgctaac
actccagaaatgtggtctgaagctattaaaattctgaaaggagaatacaccgttcgggca
atcaaagaacacaagatggatcaagcaattattttctgtaggactaaaatagattgtgat
aatatggagcagtacttcatccaacagggtggaggccctgacaggaaaggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaaacaaaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcatggtgttccatatgttatcaatgtcacactccctgatgaaaagcagaactatgtt
catcgaattgggagagtaggcagagctgagaggatgggtttggcaatctccctcgtggca
aaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgttacaat
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagtacca
gtagatgattttgatgggaaagttacatatgggcagaaaagagctctgggtggtggactg
tataaaggccatgtggatattctggcacctacagtacaagagttggcggcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttccgaaccagctgttcagaacattc
tga
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