KEGG   Astur gentilis (Northern goshawk): 126046476
Entry
126046476         CDS       T08649                                 
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
agen  Astur gentilis (Northern goshawk)
Pathway
agen04510  Focal adhesion
agen04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:agen00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    126046476
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    126046476
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:agen00536]
    126046476
Glycosaminoglycan binding proteins [BR:agen00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   126046476
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 126046476
NCBI-ProteinID: XP_049674866
LinkDB
Position
16:957561..975484
AA seq 1485 aa
MPGRRPLRLAAGLAILFLAAVAAQDRDLPEAGSCLQDGQSYSDKDVWKPEPCRICVCDTG
TVLCDEIICEELRDCPSPEIPFGECCPICPTDQPSGQPGPKGQKGEPGDIKDVVGPRGPP
GPQGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQ
MAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGAAGPMGPR
GPPGPPGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEA
GAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPA
GAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSA
GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAP
GPAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPK
GATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVM
GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS
GFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP
GTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKD
GARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGAD
GQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA
GRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGED
GPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPV
GPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPT
GKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLP
GPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPP
GNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPIRYMRADEAAGSLRQHDVEVDATLKSL
NNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGET
CVYPNPSSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLS
TEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHT
GKWGKTVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL
NT seq 4458 nt   +upstreamnt  +downstreamnt
atgcccggccgccgcccgctccgcctcgccgccggcctcgccatcctcttcctcgccgcc
gtcgccgcgcaggaccgagacctccccgaagcaggcagctgcctgcaggacgggcagagc
tatagcgataaggacgtatggaagccggagccgtgccgtatctgcgtgtgcgacacgggg
accgtcctctgcgacgagatcatctgcgaggagctgcgggattgtcccagccccgaaatc
cccttcggagagtgctgccccatatgtcccactgaccaacccagcgggcaacctggcccc
aaggggcagaagggcgaacccggtgacattaaagatgtcgtaggaccccgagggcctcca
ggaccacagggcccggcaggtgagcagggacaacgaggggaccgtggcgagaagggcgaa
aagggtgctcccggcccccggggcagggatggagaacccggcacccctggaaatcctggc
ccccctggtccccctggacctcccggcccccccggccttggtgggaacttcgcagctcag
atggcaggcggcttcgacgagaaggctggaggcgcgcagctgggcgtcatgcagggaccc
atgggccccatgggaccccgtggcccccctggaccctctggcgctcctggtccccaagga
tttcaaggcaaccccggcgagcctggcgagcccggcgctgctggtccgatgggtccccga
ggaccaccgggacctcctgggaaacccggtgatgacggtgaaacaggaaaacctggcaaa
tccggcgagcgtggccctcctggcccccagggtgctcgtggcttccctgggacgcctggt
ctccccggagtgaaaggccaccggggctaccctggattggacggtgccaaaggagaggca
ggggctcctggagccaagggcgaatccggctcacctggcgagaacggctcccctggcccc
atgggtccccgtgggctgcccggagagagaggacgtcccggcccctccggcgctgcgggt
gctcgtggcaacgacggtctccccggcccagctggaccccctggtcctgtcggcccagct
ggagcccccggcttccccggtgcccccggctcaaagggtgaagctggtcccaccggcgca
cgaggtcccgagggtgcccagggtccccgcggtgaatccggcacccccggctctcctggc
cctgccggtgcccccggtaacccagggactgacggcatccccggcgcaaagggctcggcg
ggtgccccgggcatcgccggcgctccaggcttccccggcccccgcggcccacccggaccc
cagggtgccaccggcccgctgggacccaagggacagacgggagaacccggcatcgcgggc
ttcaaaggcgaacagggaccaaagggcgagacgggacccgcaggaccccaaggtgccccc
gggccggctggcgaagaaggcaagagaggagcccgcggtgaacctggtgctgccggccct
gtgggaccacctggagagaggggtgctcctggcaatcgcggcttccccgggcaggatggg
ctcgctggacccaagggtgctccgggcgagcgtggtcccgccggcctcgcgggtcccaag
ggagccaccggcgatcccgggcgccccggagagcccgggctgcccggagccaggggtctc
accggccgtccaggtgatgctggtcctcaaggcaaagtcggcccaaccggtgctcctggc
gaggacggtcgccccggcccccccggcccgcagggtgctcgtggccagcccggcgtgatg
ggtttccccggtcccaaaggtgctaacggtgagcctggaaaagccggtgagaaaggcctc
cctggtgccccagggctgcggggtcttcctggcaaggatggtgagacgggagctgccggc
cccccaggacctgccggtcccgcgggtgagagaggagagcaaggagcccctggtccctct
ggcttccaggggctgcccgggccaccaggtccccctggagagagcggcaaacccggagat
cagggtgttcccggagaagctggtgcccccggtcttgtcggtcccagaggcgaacgcggc
ttccccggtgaacgtggctctcctggtgcacaagggctgcaaggtcctcgtgggctccct
ggcacaccgggcaccgacggacccaagggtgcaaccggaccagccggccccaatggtgcc
cagggtcccccagggcttcagggaatgcccggtgagagaggagcagccggcatcgccggt
cccaagggagaccggggagacgtcggagagaagggccccgagggagcccctggaaaggac
ggcgcacgcggtctgacgggtcccatcggtccccccggccccgctggccccaacggcgag
aagggtgaatctggccctcctggtccatctggtgctgccggtgcccgtggtgcccctggc
gagcggggcgaacccggtgcccctggtcccgccggatttgctggccccccgggtgccgac
gggcaacccggtgccaaaggcgaacaaggagagcccgggcagaagggtgacgccggtgct
cccggtccccaaggtccctctggcgcacctggcccgcagggtccgactggtgtcactggt
cccaaaggagcccggggtgctcagggcccccctggagccaccggattccccggtgccgct
ggccgtgtgggaccacctggccctaatggtaacccaggcccccccggtccccccggctct
gctggcaaagatggtcccaagggtgctcgtggtgatgccggtcccccgggccgtgctggt
gaccccggtctccaaggccctgccggcccccctggcgagaaaggtgaacccggcgaggac
ggccccgcgggtcctgacggtccccccggtccccaaggtttggcaggacagcgtggcatc
gtcggtcttcctggacagcgtggcgagagaggcttccctgggctgccgggaccatcgggc
gaacctgggaaacaaggagcacccggctctgcaggtgaccgcggcccccccggccctgtg
ggtccccccggtctgacgggtcctgccggcgaacctgggcgcgagggtaaccctggctct
gacggacccccgggcagggacggtgcagctggcgtgaagggcgatcgtggtgagaccggt
cctgtaggtgcccctggtgctcctggtgcccccggcgctcctggccccgtcggtcccacc
ggcaaacaaggagacagaggcgagacgggtgcacaaggtcccatgggtccctccggtcct
gctggcgctcgaggcatgccgggtccccaagggcctcgcggtgacaagggtgagacggga
gaggctggagagagagggctgaagggccaccgcggcttcaccgggctgcagggtcttccc
ggaccacccggtccttctggagaccaaggtgctgctggtcctgcgggtccctccggtccc
aggggtccccccggccccgtcggcccctctggcaaagatggctccaacggcatgcccggc
cccatcggtccccccggcccccgcggacgaagtggcgaaccaggtcctgcgggtcctcct
ggaaacccaggtccccccggtcctcccggtccccccggcacaggcatcgacatgtcagct
tttgctggcctgggtcagccagagaagggtcccgatcccatccgctacatgcgggcggac
gaggccgccggcagcctgcggcagcatgatgtcgaggtggacgccacgctcaagtccctc
aacaaccagatcgagagcatccgcagccctgagggctccaagaagaacccggccaggacc
tgccgtgacatcaagctttgccatcccgagtggaagagcggagactactggattgacccg
aaccagggctgcaccttggatgccatcaaagttttctgcaacatggagacgggcgagacc
tgcgtctaccccaaccccagcagcatccccaagaagaactggtggaccagcaagaccaaa
gacaagaagcacgtctggttcgcagagaccattaatggcggtttccactttagttacggc
gatgaagacctggctcccaacactgccaacatccagatgaccttcctccgtctcctgtcc
accgaaggctcccagaacgtcacttaccactgcaagaacagcatcgcctacatggacgag
gagacaggcaacctgaagaaagccatcctcatccaggggtccaacgacgtagagatcaga
gctgagggcaacagcaggttcacgtacagcgtcttggaggatggttgcacgaaacacact
ggcaaatggggcaagacagtcattgagtaccgatcgcagaagacctcgcgcctgcccatt
gtagatattgcacctatggacattggtggagccgatcaggagtttggcgtggatattggc
ccagtctgcttcttgtaa

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