Astur gentilis (Northern goshawk): 126047036
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Entry
126047036 CDS
T08649
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126047036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126047036
Enzymes [BR:
agen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
126047036
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126047036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
MMR_HSR1
TniB
ATP_bind_1
AAA_16
AAA_22
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
126047036
NCBI-ProteinID:
XP_049676155
LinkDB
All DBs
Position
17:30673336..30676343
Genome browser
AA seq
468 aa
AA seq
DB search
MATASAAPPARRAGRAXLTSLPAQPRRPGSAAAPRAGEARWRVMADDGGEEKKQVAKFEL
ERETELRFEVEASQMVQLELLTGMAEVFGTELTRNKKFTFDAGAKVAVFTWHGCTVQLSG
RTEVAYISKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVVGPTDVGKSTVCRLLLNY
AVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSLQAPLVYHFGSTTPGTNI
KLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVL
DQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDRIREYFYGFRGCFYPHAF
DVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTADSPDDN
ISETSVAGFIVVTGIDLERQVFTVLSPAPRPLPKNFLLIMDIRFMDLK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcctccgcagctccccccgcccgacgggccgggcgcgccntcttgacctca
cttccggcgcagcctcgccggcccggaagcgcagcagccccgcgggcaggcgaggcccgg
tggcgcgtcatggcggacgacggtggggaggagaagaagcaggtggccaagttcgagctg
gagcgggagaccgagctgcgcttcgaggtggaggcctcgcagatggtacagctggagctg
ctcactggcatggccgaggtcttcggcaccgagctcacccgcaacaagaagttcaccttc
gacgccggcgctaaggtggccgtcttcacctggcacggctgcaccgtccagctcagcggc
cgcaccgaggtggcctacatctccaaggacacccccatgctgctctacctcaacacccac
acagccctggagcagatgcggcggcaggcggagcgggaggacgagcgggggccccgtgtc
atggtggtgggacccaccgacgtgggtaagtcgaccgtgtgccgcttgctgctgaactat
gccgtgcgcctggggcgccggcccaccttcgtggagctggacgtgggccagggctccgtc
tccatccctggcaccatgggcgctctctacattgagcggccggccgacgtggaggagggc
ttctccctccaggccccgctcgtctaccacttcggctccaccacgcccggcaccaacatc
aagctttacaacaagatcacatcccgcctggccgacgtcttcaaccagcgctgcgaagtg
aaccgccgcgcctcggtgagcggctgtgtcatcaacacctgcggctgggtgaagggctca
ggttaccaggcgctggtgcacgccgcctccgccttcgaggtggatgtggtggtggtgctg
gaccaggagcggctctacaacgagttgaagagggacctgccccactttgtgcgcaccgtc
ctgctgcccaagtccggcggggtggtggagcgctccaaggacttccggcgggagtgccga
gatgaccgcatccgcgagtatttctatggtttccggggctgcttctaccctcacgccttc
gacgtcaagttctccgacgtcaagatctacaaggtgggggctcccaccatcccggactcc
tgcctgcccctgggcatgtcgcaggaggacaaccagctgaagctggtgccggtgacaccg
gggcgggacatggtgcaccacctgctgagcgtcagcaccgccgacagccctgacgacaac
atctccgagaccagcgtggccggcttcattgtcgtcactggcatcgacctggagcgccag
gtcttcactgtcctctcccctgctcctcggcccctgcccaagaacttcctcctcatcatg
gacatccgtttcatggacctcaaatag
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