Astur gentilis (Northern goshawk): 126047498
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Entry
126047498 CDS
T08649
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126047498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126047498
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126047498
mRNA degradation factors
5'-3' decay
Decapping complex
126047498
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
126047498
NCBI-ProteinID:
XP_049677194
LinkDB
All DBs
Position
17:complement(28697577..28708566)
Genome browser
AA seq
766 aa
AA seq
DB search
MFRYQSLEDCPLDEDEDAFQGLGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEDKP
VAAREQDGPGGEETDLLGESEDTLAERLTRLVIDSELEDPAIMQAVQTRVPAQQPGGLNS
SIWDSSAVLRRIRGPLLTQEMPSVSVLDYALPQRPPQAREEERDPSERALPRRSSSPVIG
SPPVRAVPIGTPPKQAAVPNFNQQILCPKPVHIRATMQQRYPAPYGERMSPNQLCNVPNS
SLLGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQGRV
GQMMSPASGFRAFFGAPPAPPPSQPQHPPGPGSHLQNLRPQPPMFRPDTTHLHPQHRRLL
HQRQQQNRNQHRSLNGSVGDRGGHRSSHQEQMRKDPYANLMLQREKDWVSKIQMMQLQST
DPYLDDYYYQNYFQKLEKLAAAEEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGSLGK
LTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERRYL
LSLEGERPALMGERKQKICDMYDNLRGKAPGQERPSDDHFMQIMCIRKGKRLVARILPFL
SPEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTNLPQ
SATAPAPTNLHLTAVLQNKFGLSLLFLVLSRGEELQSSDTNTELMQDNQWTELMLMATRE
LLRIPQAALAKPVSTPSNLISLFSRYVDQQKLNLLETKLHLVHGIR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgttccggtatcagtccttggaggactgtccgctggatgaggatgaagatgcgttccag
ggcctgggggaggaagatgaagatatcgaccagttcaacgatgacacctttggagccggg
gctgtcgacgacgactggcaggaggcacacgagcgactggcggaactggaggacaaaccg
gtggctgccagggaacaggatggacccggcggagaggagacggatctgctgggcgagtct
gaggacacgctggcggagcggctgaccaggctggtcatcgatagtgagctggaggatccc
gccattatgcaggctgtgcagaccagggtccccgcacagcagcctggagggttaaactcc
agcatctgggacagctcggccgtcctgcggcgcatccggggaccgcttctaactcaggag
atgccgtcggtgtccgtgctggactatgctctgcctcagagacccccgcaagctcgagaa
gaagagcgggacccctctgagcgggcgctgccccggcgttcatcatcccctgtcattggg
agcccccctgtccgggctgtccccatcggcacccctcccaagcaggctgccgtgcccaat
ttcaaccagcagatcctttgtccgaagcctgtccacatccgagctaccatgcagcagcgc
tacccggctccctacggcgagaggatgtcccccaaccagctctgcaacgtaccgaattcc
tccctcttgggccacccgttcccccacagcgtctctcccgtcctcacccacctgcagaga
gcgcagctgctgggaggagcccaggccggccgaatgtcccccagccagtttgcccgggtc
tctggcctggtcgggagccctcttccctccgtcaatcctaagctgctccagggcagagtt
gggcagatgatgtctccggccagcgggtttcgtgccttcttcggggctccccccgctcca
cctccctcgcagccgcagcacccaccgggccctggatcccacctgcagaacctgaggccg
cagcccccgatgttccgaccggacacgacccatctgcacccccagcatcgccggctcctg
caccagcgacagcagcagaaccgaaaccagcaccggagcctcaatggctcggtgggggac
cgagggggccaccggagcagccaccaggagcagatgcgcaaagacccctacgccaacctc
atgctgcagcgggagaaggactgggtgtccaagatccagatgatgcagctgcagagcact
gatccctacctggatgactattactaccagaattacttccagaagctggagaagttagca
gcagcagaggaagtccacggtgatggtcccaagaaggaacgcactaaactcatcacacct
caggtggctaagctggagcacacctacaagccagtgcagtttgagggctcgctagggaag
ctcaccgtctccagcgtgaacaacccccggaagatgattgacgcggtggtaacctcccgc
agtgaagatgatgagacgaaggagaagcaggttcgagacaagaggcgccagacccttgtc
acaattgagaagacatacagcctcctcctggacgtggaggactatgagagacgctacctc
ctgagcctggaaggcgagcggccggccctgatgggcgagagaaagcagaagatctgtgat
atgtatgacaatctgagggggaaggcgcccggacaggagaggccgagcgatgaccacttc
atgcagatcatgtgcatccggaaagggaagcgccttgtagcccggatcctgcccttcttg
tcacccgagcaagcagccgacgtactcatggcgacggctaggaacctgcccttcctcatc
aagaaggatgctcaggatgaggtgctgccctgcctgttgaggcccttctcgcacgttctc
taccaccttcccttggggacggtcaccagccttgtgcagcagctaacgaacctacctcag
agcgcgaccgcgccagcgcccaccaacctgcacctcactgctgtgctccaaaacaagttt
ggcctgtccctgctgttcttggtcttgagccgtggggaggaactgcagagctcggacacg
aacacggagttaatgcaggacaaccagtggacggagctgatgctcatggcaacccgggag
ctcctgcggatccctcaggcggccttggccaagccggtgtccaccccctcgaacctgatc
tccctcttctctcgctacgtcgaccagcagaagctgaacctgctggagacaaaattgcac
ttagtgcacgggatccggtag
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