Astur gentilis (Northern goshawk): 126047551
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Entry
126047551 CDS
T08649
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agen03009
]
126047551
03012 Translation factors [BR:
agen03012
]
126047551
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126047551
5.6.2.5 RNA 5'-3' helicase
126047551
Ribosome biogenesis [BR:
agen03009
]
Eukaryotic type
Other ribosome biogenesis factors
126047551
Translation factors [BR:
agen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126047551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
Helicase_RecD
Viral_helicase1
ResIII
DEAD
nSTAND3
AAA_16
AAA_22
Flavi_DEAD
SLFN-g3_helicase
UvrD-helicase
AAA_25
IstB_IS21
AAA
T2SSE
ABC_tran
DAP3
DnaB_C
PhoH
NTPase_1
UvrD_C_2
Herpes_ori_bp
AAA_33
Motif
Other DBs
NCBI-GeneID:
126047551
NCBI-ProteinID:
XP_049677337
LinkDB
All DBs
Position
17:30246414..30293629
Genome browser
AA seq
985 aa
AA seq
DB search
MAAEAAERQLELLREEREAEVAESRAWQESISLKELQRRGVCLLRLQAANQRTGLYGRLL
VTFQPRKYDSDAELPYNSFGPGDIVGLYDSAGQGDPLSTGIVTRVTSKAVTVAFEESRDG
MLSLDRDSSYRLLKLANDVTYNRLKKALNALKQYHSGPASDLIDVLFFSSDPSAFSDTKP
LKLYNDSLDASQREAVSFSLAQRELAIVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPS
NVAVDNLVERLAGYKARILRLGHPARLLEPIQQHSLDAVLARGDNAQIVADIRKDIDQAF
AKTKKAQDKGERSHFLSEIKALRKELKEREETAMAAALTHASVVLATNTGASSDGPLKLL
PENHFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLME
RLIEKYGEKIVKMLTMQYRMHQTIMQWASLEMYSGRLTAHPSVAQHLLKDLPGVTSTEET
TIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKTKDIAVVAPYNLQ
VDMLREHLCHRYPELEIKSVDGFQGREKEAVILSLVRSNRKGEVGFLAEDRRINVAVTRA
RRHVAVICDTRTVSNQTFLKRLVDYFSQYGEVRTAFEYLDNLVPENYTQDCSERQQGAKL
PAASGPKKQPPLGKKLKAAATKPGCQKPEASFSPNTSGPGGESPGTKGSADGFKAMLVAF
LESRDMQLDFPPSLNSHDRMLVHLMAEEYGLQHVSTGEGRDRYISVRKKEPAETSPPTAT
PRSKQLPLPQPQHPSRETPVPAEPGGSSEGSGKVDLKTLHLERVQREKARQEEAVRKAQE
PSASLQGSSRKKDKREAKGKPAVKSGANSMAEEDIDALISAAIKADNTCGFPRCKASVTT
LGQLCLHCNRRYCLSHHIPEVHGCGEKAKAHARQRISREGVLYPGSSSKDKSLDPAKRAH
LQQRLDKKLSELTSQRKSKKKDKEK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcagcggagcggcagctggagctgctgcgggaggagcgggaggccgag
gtcgccgagagcagggcatggcaggaaagcatctccctgaaggaattgcagcgcagaggt
gtctgcttgctaagactccaagctgccaaccagagaaccggcctctacggacggctgctc
gtgacatttcagcctagaaaatatgattcagatgctgagctgccctacaacagttttggg
cctggggacattgtgggcctctatgattcagctggccagggtgatccgctctccactggc
attgtaacacgtgtcacctccaaagcagtgactgttgcctttgaggaatctcgagatggc
atgctgagcttggaccgagacagctcttaccgcctgctgaaattagccaatgatgtcacc
tacaacaggctgaaaaaagctttaaatgcactaaagcagtatcacagtggtccagcctcc
gatctgattgacgtcctcttcttttcttctgatccaagtgcattcagtgacacaaagcct
ctaaagctttacaatgactcgctggatgcatcacagagagaggctgtctccttctcactg
gcacagagggagcttgccattgtccatggaccacctggcacagggaagactacaacacta
gtagagatcatcttgcaagctgtacagcaaggcctgaaagtcctgtgttgtgccccttcc
aatgttgctgtggataatctggtggaaaggctggctggctacaaagcccgcatcctgcgg
cttgggcaccctgctcgcctgctggagcccatccaacagcattccttggatgcagtcttg
gcccgtggtgacaatgcccagatagtagcagatatcaggaaggacatcgaccaggccttt
gcaaaaaccaaaaaggctcaagataagggagagcggagccattttctcagtgagattaag
gcactgagaaaggagctgaaggaacgagaagaaactgccatggctgcagcccttactcat
gccagtgttgtccttgctacaaatacaggtgcttcctctgatggcccactgaagttgctt
cctgaaaatcactttgatctcgtggtgatagatgagtgtgctcaggccctggaagccagt
tgctggatacctctgctgaaggctccgaagtgcatcctggctggggatcacaaacagctt
ccccccaccatcatctctcacaaggctgctgccaagggcctttcactcagcttgatggag
cgtctcatcgagaagtacggggagaagatagtgaagatgctgacaatgcaataccgaatg
caccagaccatcatgcagtgggcttccttggagatgtacagcggccgtctcactgctcac
ccatcagtagcccagcatttgctcaaggacctgccgggcgtcacctctacagaagagacc
acaattcccttattgcttatagacactgctggctgtggcctgtttgagctggaagtggaa
gacgaacagtctaaggggaatccaggggaggtgcagctggccggtttgcacatccaagcc
ttggtggaagctggtgtgaagacaaaagacatcgctgttgtagccccctacaacctccag
gtggacatgctaagagagcacctttgccacaggtacccagaactagaaattaaatcagtt
gatggtttccaaggaagagagaaagaggcagtgatcctgtcacttgtgagatccaacagg
aaaggtgaagtgggctttcttgcggaagaccggcggataaatgtagcagtgacccgcgcc
cgacgccatgtggctgtcatctgcgacacccgcactgtcagcaaccaaacctttctgaag
cggctggtggattatttcagccagtatggggaagtacgcacagcctttgagtacctcgac
aacctcgtgcccgaaaactacactcaagactgcagtgagcggcagcaaggtgcaaagctt
cctgcagcatctggccccaaaaagcagccgcctctggggaagaaactcaaagcagcagca
accaaaccagggtgtcagaagccagaagcgagtttctccccaaacacaagcggacctggg
ggagagagcccagggacaaaaggcagtgctgatggattcaaggccatgctggtggccttc
ctggagagccgtgacatgcagttggatttccccccatccctcaattctcacgatcgcatg
ctggttcacctaatggcagaggagtacgggctgcagcatgtgagcaccggcgaagggagg
gaccggtacatcagcgttcgcaagaaagagcctgctgagacttcgccacccacagccacc
ccccgcagcaagcagctcccccttcctcagccacaacatcccagcagggaaactcctgtc
cctgctgagccaggaggaagcagtgagggctcaggaaaagtggacctgaaaaccctgcac
ctggagagagttcagagggagaaagccagacaggaggaggccgtgcggaaggctcaggag
cccagtgccagtcttcagggcagcagcaggaaaaaagacaaaagggaagccaaaggaaag
ccagcagttaagagcggagcaaacagcatggcagaagaagatatcgacgctctgatttct
gctgccattaaagctgacaacacctgtggcttcccccgctgcaaagccagtgttacaacc
ctgggacagctttgccttcactgcaataggcgctactgcctcagccatcacatcccggag
gttcatggctgcggggagaaggccaaggcccacgcacggcagaggatcagcagagaaggg
gttctctatcccgggagcagctccaaagacaagtccctggacccagccaagagagcccat
ctccagcagcgcctggacaagaagctcagcgaactgaccagccagagaaagagcaaaaag
aaagacaaggagaaatga
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