Astur gentilis (Northern goshawk): 126048309
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Entry
126048309 CDS
T08649
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03410
Base excision repair
agen04140
Autophagy - animal
agen04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126048309
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126048309
09143 Cell growth and death
04217 Necroptosis
126048309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agen03036
]
126048309
03400 DNA repair and recombination proteins [BR:
agen03400
]
126048309
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agen04147
]
126048309
Chromosome and associated proteins [BR:
agen03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
126048309
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
126048309
MMR (mismatch excision repair)
Other MMR factors
126048309
Exosome [BR:
agen04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
126048309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
126048309
NCBI-ProteinID:
XP_049679110
LinkDB
All DBs
Position
19:4337720..4346763
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEDDEEEEEEEDEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggcgatcctaagaagccgagaggtaaaatgtcttcgtacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttacgaaaaagaaatgaaaaactatgtacca
cctaagggggaaacaaaaaagaagttcaaggatccaaatgcacctaagaggcctccttcg
gcttttttcttattttgctctgagtttcgtccaaaaatcaaaggagaacatcctggtctg
tccattggggacgtcgcaaagaaactgggtgagatgtggaacaacactgctgcagatgat
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcgtaccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagatgaagaggatgaagatgat
gaagaggaagaagaggaggaggatgaagatgatgatgatgatgaataa
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