Astur gentilis (Northern goshawk): 126049147
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Entry
126049147 CDS
T08649
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04140
Autophagy - animal
agen04148
Efferocytosis
agen05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126049147
04148 Efferocytosis
126049147
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
126049147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agen04131
]
126049147
Membrane trafficking [BR:
agen04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
126049147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
126049147
NCBI-ProteinID:
XP_049680993
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Position
22:18664532..18691447
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AA seq
884 aa
AA seq
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MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDIGEVMSSESVCCNRF
EVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTC
DLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFK
RDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALN
WTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHF
VWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRF
DESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQ
KRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRL
ENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQY
LQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIP
YLEHIIHVWEETGADFHNCLIQLYCEKVQALMKEYLSSYPADKTPVPAGEEGGDLGDYRK
KLLLFLEKSSWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENY
CHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKL
DTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQV
KCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagcatgtgccgatcttggagaaactgccgctgcagatcgactgc
ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttttgctttac
aggatcaagaaagacataggagaggttatgtcatcagaaagtgtctgttgcaataggttt
gaagtgacactagagaaatccaacaagaacttctcaaaaaagattcagcagattcatgtt
gtttctcagtttaaaattctggtcagtctattagaaaataacatttatgtccatgaccta
ttgacgtttcaacaaatcactacagtttccaaggcaaaaggtgcatctctcttcacttgt
gatctccagcagtcagatacaggggaagaggtgctgagaatgtgcgtggcagtgcggaag
aagctacaactttatttttggaaggacagagagttccatgaactacagggggacttcagt
gtacctgatgtaccaaagtctatggcctggtgtgaaaactccatctgtgtaggcttcaag
agggactattacctcatacgggtggatggaaaaggatccattaaagaactgtttcccaca
gggaagcagctggaaccgttggtagctcctgtagcagatggaaaagttgcggttggccaa
gatgatcttacagttgtgctaaacgaagaaggggtctgtactcagaaatgtgccttgaat
tggacagatattcctatagccatggaacaccagcctccctacatcattgctgttctgccg
aggtatgtggagattcgcacttttgagccccggctgctggtacagagtattgagctgcag
aggccacgcttcatcacctctggaggcacaaatattatatatgtggcaagtaatcacttt
gtttggcggctcattccagtgtcaatagccacacagatccagcagcttctgcaggacaag
cagtttgagttggctttgcagctggcagaaatgaaagatgattcagatagtgagaagcga
caacaaattcaccacataaagaacctctttgccttcaaccttttctgccagaagcgcttt
gatgaatccatgcaagtttttgccaagcttggtacagatcccactcacgtgatgggtctg
tatcctgacctgctgcccacagattacaggaaacagctacagtatcccaaccccctgcca
gggctctctggggcagagctggagaaggcacatttagctctgatagactacctaactcaa
aaaagaagtcagctggtgaagaagctaaatgattctgatcatcagtccagtacgtcaccc
ctcatggaaggaacacccacgatcaaatccaaaaagaagctgctacaaatcattgatacc
acccttttaaagtgttacctccatacaaatgtagcactggtggcaccattgctacgtctg
gagaacaatcactgccatattgaggagagtgagcatgtactaaagaaggcacacaaatat
agtgagctgataatactgtatgagaagaaaggtctgcatgagaaagcattacaggtactg
gtggatcagtcaaagaaagccaactcacctttgaagggtcatgagaggacagtgcaatat
ctgcagcatttgggtacggagaacttgcacttggtattttcctactctgtctgggtgcta
agagattttcctgaagatggactgaagatatttacagaagacctccctgaagtggaagct
ttgccacgagacaaagtgctcagcttcttgatagaaaattttaaaagcttgactattcct
tatctggaacacatcattcatgtctgggaagaaactggtgcagactttcacaactgtctg
atccagctgtactgtgagaaagtgcaggccttaatgaaagaatatctcagttcttaccct
gcagataaaactccagtgcctgctggggaggaaggaggagacttgggggattaccggaaa
aagcttctactttttctggagaagtctagctggtatgaacctagtcggctaattagtgac
ttcccctttgatggtctcctagaagaacgtgctctgctcttgggtcgtatggggaagcat
gagcaagctctgtttatttatgttcatattttgaaggacaccaacatggctgaaaactac
tgccataaacattatgacagaaacaaagatggcaacaaagatgtctatctgtcactgctt
cggatgtatctctccccacctagtgttcattgcctgggaccaatcaagatggaagtgctg
gagcctcaagccaatctgcaggctgctctgcaggttttggaactacatcacagcaaactg
gatactaccaaggcgataaacctgctcccagcaaatacccagattagtgagattcgaatc
ttcttagagaaagtccttgaagaaaatgctcagaagaaacgatttaatcaagtgctcaag
aatcttctccatgcagagtttctgagggttcaggaggagcggatcttgcatcagcaagtg
aagtgcattatcacagaggagaaggtgtgcactgtatgtaaaaaaaagataggtaacagt
gcgtttgctcgataccctaatgcaatagtcgtgcattatttctgctccaaagaagtcaac
acattggacacctga
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